mirror of
https://github.com/Stone-Red-Code/dvc.git
synced 2026-11-02 15:28:30 +01:00
Compare commits
| Author | SHA1 | Date | |
|---|---|---|---|
|
|
3375a7c39f | ||
|
|
519c47f5fc | ||
|
|
6f6038888f | ||
|
|
e223f51e7e | ||
|
|
fb628bf9ea | ||
|
|
4f4e977e53 | ||
|
|
8b1f8847fe | ||
|
|
c62a0380e9 | ||
|
|
8d8939fb67 | ||
|
|
f7a54bf2d0 | ||
|
|
1a9f5d3aa8 | ||
|
|
017a510b83 | ||
|
|
a80d224c58 | ||
|
|
49709a4810 |
@@ -66,7 +66,7 @@ jobs:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- name: Slack Notification
|
||||
uses: rtCamp/action-slack-notify@v2.2.1
|
||||
uses: rtCamp/action-slack-notify@v2.3.0
|
||||
env:
|
||||
SLACK_WEBHOOK: ${{ secrets.SLACK_WEBHOOK }}
|
||||
SLACK_COLOR: ${{ job.status }}
|
||||
|
||||
@@ -22,7 +22,7 @@ repos:
|
||||
- id: sort-simple-yaml
|
||||
- id: trailing-whitespace
|
||||
- repo: https://github.com/astral-sh/ruff-pre-commit
|
||||
rev: 'v0.2.2'
|
||||
rev: 'v0.3.4'
|
||||
hooks:
|
||||
- id: ruff
|
||||
args: [--fix, --exit-non-zero-on-fix]
|
||||
|
||||
@@ -0,0 +1,25 @@
|
||||
cff-version: 1.2.0
|
||||
title: 'DVC: Data Version Control - Git for Data & Models"'
|
||||
message: >-
|
||||
If you use this software as part of a publication and wish
|
||||
to cite it, please use the metadata from this file.
|
||||
type: software
|
||||
authors:
|
||||
- name: The DVC team and contributors
|
||||
website: 'https://github.com/iterative'
|
||||
repository-code: 'https://github.com/iterative/dvc'
|
||||
url: 'https://dvc.org'
|
||||
abstract: >-
|
||||
DVC is a tool for data science that takes advantage of existing software engineering toolset.
|
||||
It helps machine learning teams manage large datasets, make projects reproducible, and collaborate better.
|
||||
keywords:
|
||||
- ai
|
||||
- collaboration
|
||||
- data-science
|
||||
- data-version-control
|
||||
- developer-tools
|
||||
- git
|
||||
- machine-learning
|
||||
- python
|
||||
- reproducibility
|
||||
license: Apache-2.0
|
||||
@@ -3,6 +3,7 @@ DVC
|
||||
----
|
||||
Make your data science projects reproducible and shareable.
|
||||
"""
|
||||
|
||||
import dvc.logger
|
||||
from dvc.build import PKG # noqa: F401
|
||||
from dvc.version import __version__, version_tuple # noqa: F401
|
||||
|
||||
@@ -1,4 +1,5 @@
|
||||
"""Main entry point for DVC command line tool."""
|
||||
|
||||
import sys
|
||||
|
||||
from dvc.cli import main
|
||||
|
||||
+1
-1
@@ -162,7 +162,7 @@ def _get_path_func(tool: str, ext: str):
|
||||
fmt = f"{tool}.dvc-{{now:%Y%m%d}}_{{now:%H%M%S}}.{ext}"
|
||||
|
||||
def func(now: Optional["datetime"] = None) -> str:
|
||||
return fmt.format(now=now or datetime.now())
|
||||
return fmt.format(now=now or datetime.now()) # noqa: DTZ005
|
||||
|
||||
return func
|
||||
|
||||
|
||||
@@ -1,4 +1,5 @@
|
||||
"""Main parser for the dvc cli."""
|
||||
|
||||
import argparse
|
||||
import os
|
||||
from functools import lru_cache
|
||||
|
||||
@@ -13,11 +13,10 @@ logger = logger.getChild(__name__)
|
||||
|
||||
class CmdStudioLogin(CmdConfig):
|
||||
def run(self):
|
||||
from dvc_studio_client.auth import StudioAuthError, get_access_token
|
||||
|
||||
from dvc.env import DVC_STUDIO_URL
|
||||
from dvc.ui import ui
|
||||
from dvc.utils.studio import STUDIO_URL
|
||||
from dvc_studio_client.auth import StudioAuthError, get_access_token
|
||||
|
||||
name = self.args.name
|
||||
hostname = self.args.hostname or os.environ.get(DVC_STUDIO_URL) or STUDIO_URL
|
||||
|
||||
+2
-4
@@ -88,12 +88,10 @@ class TabularData(MutableSequence[Sequence["CellT"]]):
|
||||
return list(it)
|
||||
|
||||
@overload
|
||||
def __setitem__(self, item: int, value: Sequence["CellT"]) -> None:
|
||||
...
|
||||
def __setitem__(self, item: int, value: Sequence["CellT"]) -> None: ...
|
||||
|
||||
@overload
|
||||
def __setitem__(self, item: slice, value: Iterable[Sequence["CellT"]]) -> None:
|
||||
...
|
||||
def __setitem__(self, item: slice, value: Iterable[Sequence["CellT"]]) -> None: ...
|
||||
|
||||
def __setitem__(self, item, value) -> None:
|
||||
it = value
|
||||
|
||||
@@ -1,4 +1,5 @@
|
||||
"""DVC config objects."""
|
||||
|
||||
import os
|
||||
import re
|
||||
from contextlib import contextmanager
|
||||
|
||||
@@ -22,9 +22,12 @@ def download_progress(to: "Output") -> Iterator[Callable[[int], Any]]:
|
||||
from dvc.ui import ui
|
||||
from dvc.ui._rich_progress import DbDownloadProgress
|
||||
|
||||
with log_durations(logger.debug, f"Saving to {to}"), DbDownloadProgress(
|
||||
console=ui.error_console,
|
||||
) as progress:
|
||||
with (
|
||||
log_durations(logger.debug, f"Saving to {to}"),
|
||||
DbDownloadProgress(
|
||||
console=ui.error_console,
|
||||
) as progress,
|
||||
):
|
||||
task = progress.add_task("Saving", total=None, output=to)
|
||||
yield lambda n: progress.advance(task, advance=n)
|
||||
progress.update(task, description="Saved", total=0)
|
||||
|
||||
+24
-19
@@ -68,10 +68,9 @@ def is_git_ignored(repo, path):
|
||||
def check_dvcfile_path(repo, path):
|
||||
if not is_valid_filename(path):
|
||||
raise StageFileBadNameError(
|
||||
"bad DVC file name '{}'. DVC files should be named "
|
||||
"'{}' or have a '.dvc' suffix (e.g. '{}.dvc').".format(
|
||||
relpath(path), PROJECT_FILE, os.path.basename(path)
|
||||
)
|
||||
f"bad DVC file name '{relpath(path)}'. DVC files should be named "
|
||||
f"'{PROJECT_FILE}' or have a '.dvc' suffix "
|
||||
f"(e.g. '{os.path.basename(path)}.dvc')."
|
||||
)
|
||||
|
||||
if is_git_ignored(repo, path):
|
||||
@@ -243,16 +242,22 @@ class ProjectFile(FileMixin):
|
||||
|
||||
def dump_dataset(self, dataset):
|
||||
with modify_yaml(self.path, fs=self.repo.fs) as data:
|
||||
datasets: list[dict] = data.setdefault("datasets", [])
|
||||
parsed = self.datasets if data else []
|
||||
raw = data.setdefault("datasets", [])
|
||||
loc = next(
|
||||
(i for i, ds in enumerate(datasets) if ds["name"] == dataset["name"]),
|
||||
(i for i, ds in enumerate(parsed) if ds["name"] == dataset["name"]),
|
||||
None,
|
||||
)
|
||||
if loc is not None:
|
||||
apply_diff(dataset, datasets[loc])
|
||||
datasets[loc] = dataset
|
||||
if raw[loc] != parsed[loc]:
|
||||
raise ParametrizedDumpError(
|
||||
"cannot update a parametrized dataset entry"
|
||||
)
|
||||
|
||||
apply_diff(dataset, raw[loc])
|
||||
raw[loc] = dataset
|
||||
else:
|
||||
datasets.append(dataset)
|
||||
raw.append(dataset)
|
||||
self.repo.scm_context.track_file(self.relpath)
|
||||
|
||||
def _dump_lockfile(self, stage, **kwargs):
|
||||
@@ -308,29 +313,29 @@ class ProjectFile(FileMixin):
|
||||
return self.LOADER(self, self.contents, self.lockfile_contents)
|
||||
|
||||
@property
|
||||
def metrics(self) -> list[str]:
|
||||
return self.contents.get("metrics", [])
|
||||
def artifacts(self) -> dict[str, Optional[dict[str, Any]]]:
|
||||
return self.resolver.resolve_artifacts()
|
||||
|
||||
@property
|
||||
def plots(self) -> Any:
|
||||
return self.contents.get("plots", {})
|
||||
def metrics(self) -> list[str]:
|
||||
return self.resolver.resolve_metrics()
|
||||
|
||||
@property
|
||||
def params(self) -> list[str]:
|
||||
return self.contents.get("params", [])
|
||||
return self.resolver.resolve_params()
|
||||
|
||||
@property
|
||||
def plots(self) -> list[Any]:
|
||||
return self.resolver.resolve_plots()
|
||||
|
||||
@property
|
||||
def datasets(self) -> list[dict[str, Any]]:
|
||||
return self.contents.get("datasets", [])
|
||||
return self.resolver.resolve_datasets()
|
||||
|
||||
@property
|
||||
def datasets_lock(self) -> list[dict[str, Any]]:
|
||||
return self.lockfile_contents.get("datasets", [])
|
||||
|
||||
@property
|
||||
def artifacts(self) -> dict[str, Optional[dict[str, Any]]]:
|
||||
return self.contents.get("artifacts", {})
|
||||
|
||||
def remove(self, force=False):
|
||||
if not force:
|
||||
logger.warning("Cannot remove pipeline file.")
|
||||
|
||||
@@ -19,3 +19,4 @@ DVC_STUDIO_URL = "DVC_STUDIO_URL"
|
||||
DVC_SQLALCHEMY_ECHO = "DVC_SQLALCHEMY_ECHO"
|
||||
DVC_SYSTEM_CONFIG_DIR = "DVC_SYSTEM_CONFIG_DIR"
|
||||
DVC_UPDATER_ENDPOINT = "DVC_UPDATER_ENDPOINT"
|
||||
DVC_STAGE = "DVC_STAGE"
|
||||
|
||||
+6
-6
@@ -1,4 +1,5 @@
|
||||
"""Exceptions raised by the dvc."""
|
||||
|
||||
import errno
|
||||
from typing import TYPE_CHECKING, Optional
|
||||
|
||||
@@ -132,11 +133,11 @@ class MoveNotDataSourceError(DvcException):
|
||||
def __init__(self, path):
|
||||
msg = (
|
||||
"move is not permitted for stages that are not data sources. "
|
||||
"You need to either move '{path}' to a new location and edit "
|
||||
"it by hand, or remove '{path}' and create a new one at the "
|
||||
f"You need to either move {path!r} to a new location and edit "
|
||||
f"it by hand, or remove {path!r} and create a new one at the "
|
||||
"desired location."
|
||||
)
|
||||
super().__init__(msg.format(path=path))
|
||||
super().__init__(msg)
|
||||
|
||||
|
||||
class NotDvcRepoError(DvcException):
|
||||
@@ -270,9 +271,8 @@ class NoOutputInExternalRepoError(DvcException):
|
||||
from dvc.utils import relpath
|
||||
|
||||
super().__init__(
|
||||
"Output '{}' not found in target repository '{}'".format(
|
||||
relpath(path, external_repo_path), external_repo_url
|
||||
)
|
||||
f"Output {relpath(path, external_repo_path)!r} "
|
||||
f"not found in target repository '{external_repo_url}'"
|
||||
)
|
||||
|
||||
|
||||
|
||||
+1
-2
@@ -1,10 +1,9 @@
|
||||
from typing import Optional
|
||||
from urllib.parse import urlparse
|
||||
|
||||
from dvc_http import HTTPFileSystem, HTTPSFileSystem # noqa: F401
|
||||
|
||||
from dvc.config import ConfigError as RepoConfigError
|
||||
from dvc.config_schema import SCHEMA, Invalid
|
||||
from dvc_http import HTTPFileSystem, HTTPSFileSystem # noqa: F401
|
||||
|
||||
# pylint: disable=unused-import
|
||||
from dvc_objects.fs import ( # noqa: F401
|
||||
|
||||
+90
-1
@@ -21,6 +21,7 @@ from .context import (
|
||||
VarsAlreadyLoaded,
|
||||
)
|
||||
from .interpolate import (
|
||||
check_expression,
|
||||
check_recursive_parse_errors,
|
||||
is_interpolated_string,
|
||||
recurse,
|
||||
@@ -38,10 +39,16 @@ if TYPE_CHECKING:
|
||||
|
||||
logger = logger.getChild(__name__)
|
||||
|
||||
STAGES_KWD = "stages"
|
||||
VARS_KWD = "vars"
|
||||
WDIR_KWD = "wdir"
|
||||
|
||||
ARTIFACTS_KWD = "artifacts"
|
||||
DATASETS_KWD = "datasets"
|
||||
METRICS_KWD = "metrics"
|
||||
PARAMS_KWD = "params"
|
||||
PLOTS_KWD = "plots"
|
||||
STAGES_KWD = "stages"
|
||||
|
||||
FOREACH_KWD = "foreach"
|
||||
MATRIX_KWD = "matrix"
|
||||
DO_KWD = "do"
|
||||
@@ -163,6 +170,27 @@ class DataResolver:
|
||||
for name, definition in stages_data.items()
|
||||
}
|
||||
|
||||
self.artifacts = [
|
||||
ArtifactDefinition(self, self.context, name, definition, ARTIFACTS_KWD)
|
||||
for name, definition in d.get(ARTIFACTS_KWD, {}).items()
|
||||
]
|
||||
self.datasets = [
|
||||
TopDefinition(self, self.context, str(i), definition, DATASETS_KWD)
|
||||
for i, definition in enumerate(d.get(DATASETS_KWD, []))
|
||||
]
|
||||
self.metrics = [
|
||||
TopDefinition(self, self.context, str(i), definition, METRICS_KWD)
|
||||
for i, definition in enumerate(d.get(METRICS_KWD, []))
|
||||
]
|
||||
self.params = [
|
||||
TopDefinition(self, self.context, str(i), definition, PARAMS_KWD)
|
||||
for i, definition in enumerate(d.get(PARAMS_KWD, []))
|
||||
]
|
||||
self.plots = [
|
||||
TopDefinition(self, self.context, str(i), definition, PLOTS_KWD)
|
||||
for i, definition in enumerate(d.get(PLOTS_KWD, []))
|
||||
]
|
||||
|
||||
def resolve_one(self, name: str):
|
||||
group, key = split_group_name(name)
|
||||
|
||||
@@ -186,6 +214,27 @@ class DataResolver:
|
||||
logger.trace("Resolved dvc.yaml:\n%s", data)
|
||||
return {STAGES_KWD: data}
|
||||
|
||||
# Top-level sections are eagerly evaluated, whereas stages are lazily evaluated,
|
||||
# one-by-one.
|
||||
|
||||
def resolve_artifacts(self) -> dict[str, Optional[dict[str, Any]]]:
|
||||
d: dict[str, Optional[dict[str, Any]]] = {}
|
||||
for item in self.artifacts:
|
||||
d.update(item.resolve())
|
||||
return d
|
||||
|
||||
def resolve_datasets(self) -> list[dict[str, Any]]:
|
||||
return [item.resolve() for item in self.datasets]
|
||||
|
||||
def resolve_metrics(self) -> list[str]:
|
||||
return [item.resolve() for item in self.metrics]
|
||||
|
||||
def resolve_params(self) -> list[str]:
|
||||
return [item.resolve() for item in self.params]
|
||||
|
||||
def resolve_plots(self) -> list[Any]:
|
||||
return [item.resolve() for item in self.plots]
|
||||
|
||||
def has_key(self, key: str):
|
||||
return self._has_group_and_key(*split_group_name(key))
|
||||
|
||||
@@ -565,3 +614,43 @@ class MatrixDefinition:
|
||||
return entry.resolve_stage(skip_checks=True)
|
||||
except ContextError as exc:
|
||||
format_and_raise(exc, f"stage '{generated}'", self.relpath)
|
||||
|
||||
|
||||
class TopDefinition:
|
||||
def __init__(
|
||||
self,
|
||||
resolver: DataResolver,
|
||||
context: Context,
|
||||
name: str,
|
||||
definition: "Any",
|
||||
where: str,
|
||||
):
|
||||
self.resolver = resolver
|
||||
self.context = context
|
||||
self.name = name
|
||||
self.definition = definition
|
||||
self.where = where
|
||||
self.relpath = self.resolver.relpath
|
||||
|
||||
def resolve(self):
|
||||
try:
|
||||
check_recursive_parse_errors(self.definition)
|
||||
return self.context.resolve(self.definition)
|
||||
except (ParseError, ContextError) as exc:
|
||||
format_and_raise(exc, f"'{self.where}.{self.name}'", self.relpath)
|
||||
|
||||
|
||||
class ArtifactDefinition(TopDefinition):
|
||||
def resolve(self) -> dict[str, Optional[dict[str, Any]]]:
|
||||
try:
|
||||
check_expression(self.name)
|
||||
name = self.context.resolve(self.name)
|
||||
if not isinstance(name, str):
|
||||
typ = type(name).__name__
|
||||
raise ResolveError(
|
||||
f"failed to resolve '{self.where}.{self.name}'"
|
||||
f" in '{self.relpath}': expected str, got " + typ
|
||||
)
|
||||
except (ParseError, ContextError) as exc:
|
||||
format_and_raise(exc, f"'{self.where}.{self.name}'", self.relpath)
|
||||
return {name: super().resolve()}
|
||||
|
||||
@@ -1,4 +1,5 @@
|
||||
"""Manages progress bars for DVC repo."""
|
||||
|
||||
import logging
|
||||
import sys
|
||||
from threading import RLock
|
||||
|
||||
@@ -551,11 +551,7 @@ class Repo:
|
||||
|
||||
if out.protocol == "local" and match(fs_path, out.fs_path):
|
||||
return True
|
||||
|
||||
if recursive and out.fs.isin(out.fs_path, fs_path):
|
||||
return True
|
||||
|
||||
return False
|
||||
return recursive and out.fs.isin(out.fs_path, fs_path)
|
||||
|
||||
matched = list(filter(func, outs))
|
||||
if not matched:
|
||||
|
||||
@@ -200,10 +200,9 @@ class Artifacts:
|
||||
dvc_studio_config: Optional[dict[str, Any]] = None,
|
||||
**kwargs,
|
||||
) -> tuple[int, str]:
|
||||
from dvc_studio_client.model_registry import get_download_uris
|
||||
|
||||
from dvc.fs import HTTPFileSystem, generic, localfs
|
||||
from dvc.fs.callbacks import TqdmCallback
|
||||
from dvc_studio_client.model_registry import get_download_uris
|
||||
|
||||
logger.debug("Trying to download artifact '%s' via studio", name)
|
||||
out = out or os.getcwd()
|
||||
|
||||
@@ -16,8 +16,7 @@ from dvc.types import StrPath
|
||||
from dvc_data.hashfile.meta import Meta
|
||||
|
||||
if TYPE_CHECKING:
|
||||
from dql.dataset import DatasetRecord # type: ignore[import]
|
||||
from dvcx.dataset import DatasetVersion # type: ignore[import]
|
||||
from dvcx.dataset import DatasetRecord, DatasetVersion # type: ignore[import]
|
||||
from typing_extensions import Self
|
||||
|
||||
from dvc.repo import Repo
|
||||
|
||||
@@ -78,7 +78,7 @@ def _collect_rev(
|
||||
timestamp: Optional[datetime] = None
|
||||
else:
|
||||
commit = repo.scm.resolve_commit(rev)
|
||||
timestamp = datetime.fromtimestamp(commit.commit_time)
|
||||
timestamp = datetime.fromtimestamp(commit.commit_time) # noqa: DTZ006
|
||||
|
||||
return SerializableExp.from_repo(
|
||||
repo,
|
||||
@@ -338,6 +338,6 @@ def _sorted_ranges(exp_ranges: Iterable["ExpRange"]) -> list["ExpRange"]:
|
||||
if head_exp and head_exp.data and head_exp.data.timestamp:
|
||||
return head_exp.data.timestamp, head_exp.rev
|
||||
|
||||
return datetime.fromtimestamp(0), ""
|
||||
return datetime.fromtimestamp(0), "" # noqa: DTZ006
|
||||
|
||||
return sorted(exp_ranges, key=_head_timestamp, reverse=True)
|
||||
|
||||
@@ -585,9 +585,8 @@ class BaseExecutor(ABC):
|
||||
message: Optional[str] = None,
|
||||
**kwargs,
|
||||
) -> Iterator["Repo"]:
|
||||
from dvc_studio_client.post_live_metrics import post_live_metrics
|
||||
|
||||
from dvc.repo import Repo
|
||||
from dvc_studio_client.post_live_metrics import post_live_metrics
|
||||
|
||||
with Repo(os.path.join(info.root_dir, info.dvc_dir)) as dvc:
|
||||
info.status = TaskStatus.RUNNING
|
||||
|
||||
@@ -96,9 +96,10 @@ class TempDirExecutor(BaseLocalExecutor):
|
||||
temp_merge: stash_rev,
|
||||
temp_baseline: entry.baseline_rev,
|
||||
}
|
||||
with get_exp_rwlock(
|
||||
repo, writes=[temp_head, temp_merge, temp_baseline]
|
||||
), self.set_temp_refs(scm, temp_ref_dict):
|
||||
with (
|
||||
get_exp_rwlock(repo, writes=[temp_head, temp_merge, temp_baseline]),
|
||||
self.set_temp_refs(scm, temp_ref_dict),
|
||||
):
|
||||
# Executor will be initialized with an empty git repo that
|
||||
# we populate by pushing:
|
||||
# EXEC_HEAD - the base commit for this experiment
|
||||
|
||||
@@ -4,7 +4,6 @@ from collections.abc import Collection, Generator, Iterable, Mapping
|
||||
from dataclasses import asdict, dataclass
|
||||
from typing import TYPE_CHECKING, Any, NamedTuple, Optional, Union
|
||||
|
||||
from dvc_studio_client.post_live_metrics import get_studio_config
|
||||
from funcy import retry
|
||||
|
||||
from dvc.dependency import ParamsDependency
|
||||
@@ -24,6 +23,7 @@ from dvc.repo.experiments.utils import (
|
||||
)
|
||||
from dvc.utils.objects import cached_property
|
||||
from dvc.utils.studio import config_to_env
|
||||
from dvc_studio_client.post_live_metrics import get_studio_config
|
||||
|
||||
from .utils import get_remote_executor_refs
|
||||
|
||||
@@ -180,7 +180,7 @@ class BaseStashQueue(ABC):
|
||||
|
||||
def _get_timestamp(rev: str) -> datetime:
|
||||
commit = self.scm.resolve_commit(rev)
|
||||
return datetime.fromtimestamp(commit.commit_time)
|
||||
return datetime.fromtimestamp(commit.commit_time) # noqa: DTZ006
|
||||
|
||||
def _format_entry(
|
||||
entry: QueueEntry,
|
||||
|
||||
@@ -474,10 +474,10 @@ class LocalCeleryQueue(BaseStashQueue):
|
||||
self.scm, exp_names, git_remote
|
||||
)
|
||||
if not git_remote:
|
||||
queue_entry_match: dict[
|
||||
str, Optional["QueueEntry"]
|
||||
] = self.match_queue_entry_by_name(
|
||||
exp_names, self.iter_queued(), self.iter_done()
|
||||
queue_entry_match: dict[str, Optional["QueueEntry"]] = (
|
||||
self.match_queue_entry_by_name(
|
||||
exp_names, self.iter_queued(), self.iter_done()
|
||||
)
|
||||
)
|
||||
|
||||
for exp_name in exp_names:
|
||||
|
||||
@@ -44,9 +44,9 @@ def remove( # noqa: C901, PLR0912
|
||||
exp_ref_list: list["ExpRefInfo"] = []
|
||||
queue_entry_list: list["QueueEntry"] = []
|
||||
if exp_names:
|
||||
results: dict[
|
||||
str, "ExpRefAndQueueEntry"
|
||||
] = celery_queue.get_ref_and_entry_by_names(exp_names, git_remote)
|
||||
results: dict[str, "ExpRefAndQueueEntry"] = (
|
||||
celery_queue.get_ref_and_entry_by_names(exp_names, git_remote)
|
||||
)
|
||||
remained: list[str] = []
|
||||
for name, result in results.items():
|
||||
if not result.exp_ref_info and not result.queue_entry:
|
||||
|
||||
@@ -306,7 +306,7 @@ def format_time(
|
||||
return fill_value
|
||||
if iso:
|
||||
return timestamp.isoformat()
|
||||
if timestamp.date() == date.today():
|
||||
if timestamp.date() == date.today(): # noqa: DTZ011
|
||||
fmt = "%I:%M %p"
|
||||
else:
|
||||
fmt = "%b %d, %Y"
|
||||
|
||||
@@ -287,7 +287,7 @@ def gen_random_name():
|
||||
# fmt: on
|
||||
# Use custom random generator to make sure that names are random even if
|
||||
# global random seed is set (common for ML pipelines).
|
||||
random_generator = random.Random()
|
||||
random_generator = random.Random() # noqa: S311
|
||||
adjective = random_generator.choice(ADJECTIVES)
|
||||
noun = random_generator.choice(NOUNS)
|
||||
return f"{adjective}-{noun}"
|
||||
|
||||
+2
-4
@@ -49,14 +49,12 @@ def _collect_indexes( # noqa: PLR0913
|
||||
config["core"] = core
|
||||
|
||||
def stage_filter(stage: "Stage") -> bool:
|
||||
if push and stage.is_repo_import:
|
||||
return False
|
||||
return True
|
||||
return not (push and stage.is_repo_import)
|
||||
|
||||
def outs_filter(out: "Output") -> bool:
|
||||
if push and not out.can_push:
|
||||
return False
|
||||
return True
|
||||
return not (remote and out.remote and remote != out.remote)
|
||||
|
||||
for rev in repo.brancher(
|
||||
revs=revs,
|
||||
|
||||
@@ -369,11 +369,9 @@ def _matches(targets, config_file, plot_id):
|
||||
return True
|
||||
|
||||
full_id = get_plot_id(plot_id, config_file)
|
||||
if any(
|
||||
return any(
|
||||
(re.match(target, plot_id) or re.match(target, full_id)) for target in targets
|
||||
):
|
||||
return True
|
||||
return False
|
||||
)
|
||||
|
||||
|
||||
def _normpath(path):
|
||||
|
||||
+2
-6
@@ -25,15 +25,11 @@ def build_outs_trie(stages):
|
||||
overlapping = out
|
||||
if parent and overlapping:
|
||||
msg = (
|
||||
"The output paths:\n'{}'('{}')\n'{}'('{}')\n"
|
||||
f"The output paths:\n'{parent!s}'('{parent.stage.addressing}')\n"
|
||||
f"'{overlapping!s}'('{overlapping.stage.addressing}')\n"
|
||||
"overlap and are thus in the same tracked directory.\n"
|
||||
"To keep reproducibility, outputs should be in separate "
|
||||
"tracked directories or tracked individually."
|
||||
).format(
|
||||
str(parent),
|
||||
parent.stage.addressing,
|
||||
str(overlapping),
|
||||
overlapping.stage.addressing,
|
||||
)
|
||||
raise OverlappingOutputPathsError(parent, overlapping, msg)
|
||||
|
||||
|
||||
@@ -76,14 +76,10 @@ def worktree_view(
|
||||
"""
|
||||
|
||||
def stage_filter(stage: "Stage") -> bool:
|
||||
if push and stage.is_repo_import:
|
||||
return False
|
||||
return True
|
||||
return not (push and stage.is_repo_import)
|
||||
|
||||
def outs_filter(out: "Output") -> bool:
|
||||
if not out.is_in_repo or not out.use_cache or (push and not out.can_push):
|
||||
return False
|
||||
return True
|
||||
return out.is_in_repo and out.use_cache and (not push or out.can_push)
|
||||
|
||||
return index.targets_view(
|
||||
targets,
|
||||
|
||||
+7
-7
@@ -1,4 +1,5 @@
|
||||
"""Manages source control systems (e.g. Git)."""
|
||||
|
||||
import os
|
||||
from collections.abc import Iterator, Mapping
|
||||
from contextlib import contextmanager
|
||||
@@ -70,8 +71,7 @@ def SCM(
|
||||
*,
|
||||
search_parent_directories: bool = ...,
|
||||
no_scm: Literal[False] = ...,
|
||||
) -> "Git":
|
||||
...
|
||||
) -> "Git": ...
|
||||
|
||||
|
||||
@overload
|
||||
@@ -80,8 +80,7 @@ def SCM(
|
||||
*,
|
||||
search_parent_directories: bool = ...,
|
||||
no_scm: Literal[True],
|
||||
) -> "NoSCM":
|
||||
...
|
||||
) -> "NoSCM": ...
|
||||
|
||||
|
||||
@overload
|
||||
@@ -90,8 +89,7 @@ def SCM(
|
||||
*,
|
||||
search_parent_directories: bool = ...,
|
||||
no_scm: bool = ...,
|
||||
) -> Union["Git", "NoSCM"]:
|
||||
...
|
||||
) -> Union["Git", "NoSCM"]: ...
|
||||
|
||||
|
||||
def SCM(root_dir, *, search_parent_directories=True, no_scm=False):
|
||||
@@ -241,7 +239,9 @@ def iter_revs(
|
||||
if commit_date:
|
||||
from datetime import datetime
|
||||
|
||||
commit_datestamp = datetime.strptime(commit_date, "%Y-%m-%d").timestamp()
|
||||
commit_datestamp = (
|
||||
datetime.strptime(commit_date, "%Y-%m-%d").timestamp() # noqa: DTZ007
|
||||
)
|
||||
|
||||
def _time_filter(rev):
|
||||
try:
|
||||
|
||||
+4
-1
@@ -39,7 +39,7 @@ def _enforce_cmd_list(cmd):
|
||||
|
||||
|
||||
def prepare_kwargs(stage, run_env=None):
|
||||
from dvc.env import DVC_ROOT
|
||||
from dvc.env import DVC_ROOT, DVC_STAGE
|
||||
|
||||
kwargs = {"cwd": stage.wdir, "env": fix_env(None), "close_fds": True}
|
||||
|
||||
@@ -48,6 +48,9 @@ def prepare_kwargs(stage, run_env=None):
|
||||
if DVC_ROOT not in kwargs["env"]:
|
||||
kwargs["env"][DVC_ROOT] = stage.repo.root_dir
|
||||
|
||||
# Create DVC_STAGE env variable for every command
|
||||
kwargs["env"][DVC_STAGE] = stage.addressing
|
||||
|
||||
# NOTE: when you specify `shell=True`, `Popen` [1] will default to
|
||||
# `/bin/sh` on *nix and will add ["/bin/sh", "-c"] to your command.
|
||||
# But we actually want to run the same shell that we are running
|
||||
|
||||
+1
-3
@@ -92,9 +92,7 @@ def check_no_externals(stage):
|
||||
from dvc.utils import format_link
|
||||
|
||||
def _is_cached_external(out):
|
||||
if out.is_in_repo or not out.use_cache:
|
||||
return False
|
||||
return True
|
||||
return not out.is_in_repo and out.use_cache
|
||||
|
||||
outs = [str(out) for out in stage.outs if _is_cached_external(out)]
|
||||
if not outs:
|
||||
|
||||
@@ -1,6 +1,7 @@
|
||||
"""
|
||||
Tests for modifications to an existing dataset.
|
||||
"""
|
||||
|
||||
import glob
|
||||
import os
|
||||
import random
|
||||
|
||||
@@ -39,9 +39,7 @@ def apply_diff(src, dest): # noqa: C901
|
||||
dest[i] = value
|
||||
else:
|
||||
raise AssertionError( # noqa: TRY004
|
||||
"Can't apply diff from {} to {}".format(
|
||||
src.__class__.__name__, dest.__class__.__name__
|
||||
)
|
||||
f"Can't apply diff from {type(src).__name__} to {type(dest).__name__}"
|
||||
)
|
||||
|
||||
|
||||
|
||||
@@ -1,4 +1,5 @@
|
||||
"""Common utilities for serialize."""
|
||||
|
||||
import os
|
||||
from contextlib import AbstractContextManager, contextmanager
|
||||
from typing import TYPE_CHECKING, Any, Callable, Optional, Protocol, TextIO, Union
|
||||
@@ -15,25 +16,21 @@ if TYPE_CHECKING:
|
||||
class DumperFn(Protocol):
|
||||
def __call__(
|
||||
self, path: "StrPath", data: Any, fs: Optional["FileSystem"] = None
|
||||
) -> Any:
|
||||
...
|
||||
) -> Any: ...
|
||||
|
||||
|
||||
class DumpersFn(Protocol):
|
||||
def __call__(self, data: Any, stream: TextIO) -> Any:
|
||||
...
|
||||
def __call__(self, data: Any, stream: TextIO) -> Any: ...
|
||||
|
||||
|
||||
class ModifierFn(Protocol):
|
||||
def __call__(
|
||||
self, path: "StrPath", fs: Optional["FileSystem"] = None
|
||||
) -> AbstractContextManager[dict]:
|
||||
...
|
||||
) -> AbstractContextManager[dict]: ...
|
||||
|
||||
|
||||
class LoaderFn(Protocol):
|
||||
def __call__(self, path: "StrPath", fs: Optional["FileSystem"] = None) -> Any:
|
||||
...
|
||||
def __call__(self, path: "StrPath", fs: Optional["FileSystem"] = None) -> Any: ...
|
||||
|
||||
|
||||
ReadType = Union[bytes, None, str]
|
||||
|
||||
@@ -6,6 +6,7 @@ Used for parsing dvc.yaml, dvc.lock and .dvc files.
|
||||
|
||||
Not to be confused with strictyaml, a python library with similar motivations.
|
||||
"""
|
||||
|
||||
import re
|
||||
import typing
|
||||
from contextlib import suppress
|
||||
|
||||
+12
-6
@@ -31,24 +31,30 @@ classifiers = [
|
||||
dynamic = ["version"]
|
||||
|
||||
dependencies = [
|
||||
"attrs>=22.2.0",
|
||||
"celery",
|
||||
"colorama>=0.3.9",
|
||||
"configobj>=5.0.6",
|
||||
"distro>=1.3",
|
||||
"dpath<3,>=2.1.0",
|
||||
"dvc-data>=3.13,<3.15",
|
||||
"dulwich",
|
||||
"dvc-data>=3.15,<3.16",
|
||||
"dvc-http>=2.29.0",
|
||||
"dvc-objects",
|
||||
"dvc-render>=1.0.1,<2",
|
||||
"dvc-studio-client>=0.20,<1",
|
||||
"dvc-task>=0.3.0,<1",
|
||||
"flatten_dict<1,>=0.4.1",
|
||||
# https://github.com/iterative/dvc/issues/9654
|
||||
"flufl.lock>=5,<8",
|
||||
"flufl.lock>=5,<8", # https://github.com/iterative/dvc/issues/9654
|
||||
"fsspec",
|
||||
"funcy>=1.14",
|
||||
"grandalf<1,>=0.7",
|
||||
"gto>=1.6.0,<2",
|
||||
"hydra-core>=1.1",
|
||||
"iterative-telemetry>=0.0.7",
|
||||
"kombu",
|
||||
"networkx>=2.5",
|
||||
"omegaconf",
|
||||
"packaging>=19",
|
||||
"pathspec>=0.10.3",
|
||||
"platformdirs<4,>=3.1.1",
|
||||
@@ -261,10 +267,10 @@ ignore = [
|
||||
"TRY003", "TRY300", "PLR2004", "PLW2901", "LOG007",
|
||||
]
|
||||
select = [
|
||||
"F", "E", "W", "C90", "I", "N", "UP", "YTT", "ASYNC", "S", "BLE", "B", "A", "C4", "T10",
|
||||
"F", "E", "W", "C90", "I", "N", "UP", "YTT", "ASYNC", "S", "BLE", "B", "A", "C4", "DTZ", "T10",
|
||||
"EXE", "ISC", "ICN", "G", "INP", "PIE", "T20", "PYI", "PT", "Q", "RSE", "RET",
|
||||
"SLOT", "SIM", "TID", "TCH", "ARG", "PGH", "PLC", "PLE", "PLR", "PLW", "TRY",
|
||||
"FLY", "PERF101", "LOG", "RUF", "RUF022", "RUF023", "RUF024", "RUF025", "RUF026",
|
||||
"FLY", "PERF101", "LOG", "RUF", "RUF022", "RUF023", "RUF024", "RUF025", "RUF026", "RUF027"
|
||||
]
|
||||
preview = true
|
||||
explicit-preview-rules = true
|
||||
@@ -286,7 +292,7 @@ strict = true
|
||||
ignore-variadic-names = true
|
||||
|
||||
[tool.ruff.lint.isort]
|
||||
known-first-party = ["dvc", "dvc_data", "dvc_objects", "dvc_render", "dvc_task", "tests"]
|
||||
known-first-party = ["dvc", "dvc_*", "tests"]
|
||||
|
||||
[tool.ruff.lint.pep8-naming]
|
||||
extend-ignore-names = ["M", "SCM"]
|
||||
|
||||
@@ -43,7 +43,6 @@ from global repo template to creating everything inplace, which:
|
||||
- does not create unnecessary files
|
||||
"""
|
||||
|
||||
|
||||
import os
|
||||
|
||||
import pytest
|
||||
|
||||
@@ -196,3 +196,13 @@ def test_get_path(tmp_dir, dvc):
|
||||
assert dvc.artifacts.get_path("subdir/dvc.yaml:myart") == os.path.join(
|
||||
"subdir", "myart.pkl"
|
||||
)
|
||||
|
||||
|
||||
def test_parametrized(tmp_dir, dvc):
|
||||
(tmp_dir / "params.yaml").dump({"path": "myart.pkl"})
|
||||
(tmp_dir / "dvc.yaml").dump(
|
||||
{"artifacts": {"myart": {"type": "model", "path": "${path}"}}}
|
||||
)
|
||||
assert tmp_dir.dvc.artifacts.read() == {
|
||||
"dvc.yaml": {"myart": Artifact(path="myart.pkl", type="model")}
|
||||
}
|
||||
|
||||
@@ -101,7 +101,7 @@ def test_show_simple(tmp_dir, scm, dvc, exp_stage):
|
||||
@pytest.mark.parametrize("workspace", [True, False])
|
||||
def test_show_experiment(tmp_dir, scm, dvc, exp_stage, workspace):
|
||||
baseline_rev = scm.get_rev()
|
||||
timestamp = datetime.fromtimestamp(
|
||||
timestamp = datetime.fromtimestamp( # noqa: DTZ006
|
||||
scm.gitpython.repo.rev_parse(baseline_rev).committed_date
|
||||
)
|
||||
|
||||
@@ -423,7 +423,7 @@ def test_show_csv(tmp_dir, scm, dvc, exp_stage, capsys):
|
||||
baseline_rev = scm.get_rev()
|
||||
|
||||
def _get_rev_isotimestamp(rev):
|
||||
return datetime.fromtimestamp(
|
||||
return datetime.fromtimestamp( # noqa: DTZ006
|
||||
scm.gitpython.repo.rev_parse(rev).committed_date
|
||||
).isoformat()
|
||||
|
||||
@@ -453,15 +453,11 @@ def test_show_csv(tmp_dir, scm, dvc, exp_stage, capsys):
|
||||
in cap.out
|
||||
)
|
||||
assert (
|
||||
"{},{},branch_base,{},,2,2,{}".format(
|
||||
ref_info1.name, rev1[:7], _get_rev_isotimestamp(rev1), data_hash
|
||||
)
|
||||
f"{ref_info1.name},{rev1[:7]},branch_base,{_get_rev_isotimestamp(rev1)},,2,2,{data_hash}"
|
||||
in cap.out
|
||||
)
|
||||
assert (
|
||||
"{},{},branch_commit,{},,3,3,{}".format(
|
||||
ref_info2.name, rev2[:7], _get_rev_isotimestamp(rev2), data_hash
|
||||
)
|
||||
f"{ref_info2.name},{rev2[:7]},branch_commit,{_get_rev_isotimestamp(rev2)},,3,3,{data_hash}"
|
||||
in cap.out
|
||||
)
|
||||
|
||||
@@ -656,7 +652,7 @@ def test_metrics_renaming(tmp_dir, dvc, scm, capsys, copy_script):
|
||||
cap = capsys.readouterr()
|
||||
|
||||
def _get_rev_isotimestamp(rev):
|
||||
return datetime.fromtimestamp(
|
||||
return datetime.fromtimestamp( # noqa: DTZ006
|
||||
scm.gitpython.repo.rev_parse(rev).committed_date
|
||||
).isoformat()
|
||||
|
||||
|
||||
@@ -342,3 +342,12 @@ def test_cached_metrics(tmp_dir, dvc, scm, remote):
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
def test_top_level_parametrized(tmp_dir, dvc):
|
||||
tmp_dir.dvc_gen("metrics.yaml", "foo: 3\nbar: 10")
|
||||
(tmp_dir / "params.yaml").dump({"metric_file": "metrics.yaml"})
|
||||
(tmp_dir / "dvc.yaml").dump({"metrics": ["${metric_file}"]})
|
||||
assert dvc.metrics.show() == {
|
||||
"": {"data": {"metrics.yaml": {"data": {"foo": 3, "bar": 10}}}}
|
||||
}
|
||||
|
||||
@@ -178,3 +178,17 @@ def test_cached_params(tmp_dir, dvc, scm, remote):
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
def test_top_level_parametrized(tmp_dir, dvc):
|
||||
(tmp_dir / "param.json").dump({"foo": 3, "bar": 10})
|
||||
(tmp_dir / "params.yaml").dump({"param_file": "param.json"})
|
||||
(tmp_dir / "dvc.yaml").dump({"params": ["${param_file}"]})
|
||||
assert dvc.params.show() == {
|
||||
"": {
|
||||
"data": {
|
||||
"param.json": {"data": {"foo": 3, "bar": 10}},
|
||||
"params.yaml": {"data": {"param_file": "param.json"}},
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@@ -1,6 +1,5 @@
|
||||
"""Negative tests for the parametrization."""
|
||||
|
||||
|
||||
import logging
|
||||
import re
|
||||
|
||||
|
||||
@@ -1,4 +1,5 @@
|
||||
"""Testing happy paths for the foreach."""
|
||||
|
||||
import os
|
||||
|
||||
import pytest
|
||||
|
||||
@@ -0,0 +1,168 @@
|
||||
from dvc.parsing import DataResolver
|
||||
|
||||
|
||||
def test_params(tmp_dir, dvc):
|
||||
(tmp_dir / "params.yaml").dump(
|
||||
{"params": {"param1": "params.json", "param2": "params.toml"}}
|
||||
)
|
||||
|
||||
template = {"params": ["${params.param1}", "param11", "${params.param2}"]}
|
||||
resolver = DataResolver(dvc, tmp_dir, template)
|
||||
assert resolver.resolve_params() == ["params.json", "param11", "params.toml"]
|
||||
|
||||
|
||||
def test_metrics(tmp_dir, dvc):
|
||||
(tmp_dir / "params.yaml").dump(
|
||||
{"metrics": {"metric1": "metrics.json", "metric2": "metrics.toml"}}
|
||||
)
|
||||
|
||||
template = {"metrics": ["${metrics.metric1}", "metric11", "${metrics.metric2}"]}
|
||||
resolver = DataResolver(dvc, tmp_dir, template)
|
||||
assert resolver.resolve_metrics() == ["metrics.json", "metric11", "metrics.toml"]
|
||||
|
||||
|
||||
def test_plots(tmp_dir, dvc):
|
||||
template = {
|
||||
"plots": [
|
||||
{
|
||||
"${plots.plot1_name}": {
|
||||
"x": "${plots.x_cls}",
|
||||
"y": {
|
||||
"train_classes.csv": "${plots.y_train_cls}",
|
||||
"test_classes.csv": [
|
||||
"${plots.y_train_cls}",
|
||||
"${plots.y_test_cls}",
|
||||
],
|
||||
},
|
||||
"title": "Compare test vs train confusion matrix",
|
||||
"template": "confusion",
|
||||
"x_label": "Actual class",
|
||||
"y_label": "Predicted class",
|
||||
}
|
||||
},
|
||||
{"eval/importance2.png": None},
|
||||
{"${plots.plot3_name}": None},
|
||||
"eval/importance4.png",
|
||||
"${plots.plot5_name}",
|
||||
],
|
||||
}
|
||||
|
||||
(tmp_dir / "params.yaml").dump(
|
||||
{
|
||||
"plots": {
|
||||
"x_cls": "actual_class",
|
||||
"y_train_cls": "predicted_class",
|
||||
"y_test_cls": "predicted_class2",
|
||||
"plot1_name": "eval/importance1.png",
|
||||
"plot3_name": "eval/importance3.png",
|
||||
"plot5_name": "eval/importance5.png",
|
||||
}
|
||||
}
|
||||
)
|
||||
resolver = DataResolver(dvc, tmp_dir, template)
|
||||
assert resolver.resolve_plots() == [
|
||||
{
|
||||
"eval/importance1.png": {
|
||||
"x": "actual_class",
|
||||
"y": {
|
||||
"train_classes.csv": "predicted_class",
|
||||
"test_classes.csv": ["predicted_class", "predicted_class2"],
|
||||
},
|
||||
"title": "Compare test vs train confusion matrix",
|
||||
"template": "confusion",
|
||||
"x_label": "Actual class",
|
||||
"y_label": "Predicted class",
|
||||
}
|
||||
},
|
||||
{"eval/importance2.png": None},
|
||||
{"eval/importance3.png": None},
|
||||
"eval/importance4.png",
|
||||
"eval/importance5.png",
|
||||
]
|
||||
|
||||
|
||||
def test_artifacts(tmp_dir, dvc):
|
||||
template = {
|
||||
"artifacts": {
|
||||
"${artifacts.name}": {
|
||||
"path": "${artifacts.path}",
|
||||
"type": "model",
|
||||
"desc": "CV classification model, ResNet50",
|
||||
"labels": ["${artifacts.label1}", "${artifacts.label2}"],
|
||||
"meta": {"framework": "${artifacts.framework}"},
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
(tmp_dir / "params.yaml").dump(
|
||||
{
|
||||
"artifacts": {
|
||||
"name": "cv-classification",
|
||||
"path": "models/resnet.pt",
|
||||
"label1": "resnet50",
|
||||
"label2": "classification",
|
||||
"framework": "pytorch",
|
||||
}
|
||||
}
|
||||
)
|
||||
|
||||
resolver = DataResolver(dvc, tmp_dir, template)
|
||||
assert resolver.resolve_artifacts() == {
|
||||
"cv-classification": {
|
||||
"path": "models/resnet.pt",
|
||||
"type": "model",
|
||||
"desc": "CV classification model, ResNet50",
|
||||
"labels": ["resnet50", "classification"],
|
||||
"meta": {"framework": "pytorch"},
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
def test_datasets(tmp_dir, dvc):
|
||||
template = {
|
||||
"datasets": [
|
||||
{"name": "${ds1.name}", "url": "${ds1.url}", "type": "dvcx"},
|
||||
{
|
||||
"name": "${ds2.name}",
|
||||
"url": "${ds2.url}",
|
||||
"type": "dvc",
|
||||
"path": "${ds2.path}",
|
||||
},
|
||||
{
|
||||
"name": "${ds3.name}",
|
||||
"url": "${ds3.url}",
|
||||
"type": "url",
|
||||
},
|
||||
]
|
||||
}
|
||||
|
||||
(tmp_dir / "params.yaml").dump(
|
||||
{
|
||||
"ds1": {"name": "dogs", "url": "dvcx://dogs"},
|
||||
"ds2": {
|
||||
"name": "example-get-started",
|
||||
"url": "[email protected]:iterative/example-get-started.git",
|
||||
"path": "path",
|
||||
},
|
||||
"ds3": {
|
||||
"name": "cloud-versioning-demo",
|
||||
"url": "s3://cloud-versioning-demo",
|
||||
},
|
||||
}
|
||||
)
|
||||
|
||||
resolver = DataResolver(dvc, tmp_dir, template)
|
||||
assert resolver.resolve_datasets() == [
|
||||
{"name": "dogs", "url": "dvcx://dogs", "type": "dvcx"},
|
||||
{
|
||||
"name": "example-get-started",
|
||||
"url": "[email protected]:iterative/example-get-started.git",
|
||||
"type": "dvc",
|
||||
"path": "path",
|
||||
},
|
||||
{
|
||||
"name": "cloud-versioning-demo",
|
||||
"url": "s3://cloud-versioning-demo",
|
||||
"type": "url",
|
||||
},
|
||||
]
|
||||
@@ -500,3 +500,73 @@ def test_show_plots_defined_with_native_os_path(tmp_dir, dvc, scm, capsys):
|
||||
json_data = json_out["data"]
|
||||
assert json_data[f"{top_level_plot}"]
|
||||
assert json_data[stage_plot]
|
||||
|
||||
|
||||
@pytest.mark.parametrize(
|
||||
"plot_config,expanded_config,expected_datafiles",
|
||||
[
|
||||
(
|
||||
{
|
||||
"comparison": {
|
||||
"x": {"${data1}": "${a}"},
|
||||
"y": {"sub/dir/data2.json": "${b}"},
|
||||
}
|
||||
},
|
||||
{
|
||||
"comparison": {
|
||||
"x": {"data1.json": "a"},
|
||||
"y": {"sub/dir/data2.json": "b"},
|
||||
}
|
||||
},
|
||||
["data1.json", os.path.join("sub", "dir", "data2.json")],
|
||||
),
|
||||
(
|
||||
{"${data1}": None},
|
||||
{"data1.json": {}},
|
||||
["data1.json"],
|
||||
),
|
||||
(
|
||||
"${data1}",
|
||||
{"data1.json": {}},
|
||||
["data1.json"],
|
||||
),
|
||||
],
|
||||
)
|
||||
def test_top_level_parametrized(
|
||||
tmp_dir, dvc, plot_config, expanded_config, expected_datafiles
|
||||
):
|
||||
(tmp_dir / "params.yaml").dump(
|
||||
{"data1": "data1.json", "a": "a", "b": "b", "c": "c"}
|
||||
)
|
||||
data = {
|
||||
"data1.json": [
|
||||
{"a": 1, "b": 0.1, "c": 0.01},
|
||||
{"a": 2, "b": 0.2, "c": 0.02},
|
||||
],
|
||||
os.path.join("sub", "dir", "data.json"): [
|
||||
{"a": 6, "b": 0.6, "c": 0.06},
|
||||
{"a": 7, "b": 0.7, "c": 0.07},
|
||||
],
|
||||
}
|
||||
|
||||
for filename, content in data.items():
|
||||
dirname = os.path.dirname(filename)
|
||||
if dirname:
|
||||
os.makedirs(dirname)
|
||||
(tmp_dir / filename).dump_json(content, sort_keys=True)
|
||||
|
||||
config_file = "dvc.yaml"
|
||||
with modify_yaml(config_file) as dvcfile_content:
|
||||
dvcfile_content["plots"] = [plot_config]
|
||||
|
||||
result = dvc.plots.show()
|
||||
|
||||
assert expanded_config == get_plot(
|
||||
result, "workspace", typ="definitions", file=config_file
|
||||
)
|
||||
|
||||
for filename, content in data.items():
|
||||
if filename in expected_datafiles:
|
||||
assert content == get_plot(result, "workspace", file=filename)
|
||||
else:
|
||||
assert filename not in get_plot(result, "workspace")
|
||||
|
||||
@@ -1,6 +1,7 @@
|
||||
import logging
|
||||
import os
|
||||
import shutil
|
||||
from os.path import join
|
||||
|
||||
import pytest
|
||||
|
||||
@@ -8,6 +9,7 @@ import dvc_data
|
||||
from dvc.cli import main
|
||||
from dvc.exceptions import CheckoutError
|
||||
from dvc.repo.open_repo import clean_repos
|
||||
from dvc.scm import CloneError
|
||||
from dvc.stage.exceptions import StageNotFound
|
||||
from dvc.testing.remote_tests import TestRemote # noqa: F401
|
||||
from dvc.utils.fs import remove
|
||||
@@ -580,6 +582,58 @@ def test_target_remote(tmp_dir, dvc, make_remote):
|
||||
}
|
||||
|
||||
|
||||
def test_output_target_remote(tmp_dir, dvc, make_remote):
|
||||
make_remote("default", default=True)
|
||||
make_remote("for_foo", default=False)
|
||||
make_remote("for_bar", default=False)
|
||||
|
||||
tmp_dir.dvc_gen("foo", "foo")
|
||||
tmp_dir.dvc_gen("bar", "bar")
|
||||
tmp_dir.dvc_gen("data", {"one": "one", "two": "two"})
|
||||
|
||||
with (tmp_dir / "foo.dvc").modify() as d:
|
||||
d["outs"][0]["remote"] = "for_foo"
|
||||
|
||||
with (tmp_dir / "bar.dvc").modify() as d:
|
||||
d["outs"][0]["remote"] = "for_bar"
|
||||
|
||||
# push foo and data to for_foo remote
|
||||
dvc.push(remote="for_foo")
|
||||
|
||||
default = dvc.cloud.get_remote_odb("default")
|
||||
for_foo = dvc.cloud.get_remote_odb("for_foo")
|
||||
for_bar = dvc.cloud.get_remote_odb("for_bar")
|
||||
|
||||
# hashes for foo and data, but not bar
|
||||
expected = {
|
||||
"acbd18db4cc2f85cedef654fccc4a4d8",
|
||||
"f97c5d29941bfb1b2fdab0874906ab82",
|
||||
"6b18131dc289fd37006705affe961ef8.dir",
|
||||
"b8a9f715dbb64fd5c56e7783c6820a61",
|
||||
}
|
||||
|
||||
assert set(default.all()) == set()
|
||||
assert set(for_foo.all()) == expected
|
||||
assert set(for_bar.all()) == set()
|
||||
|
||||
# push everything without specifying remote
|
||||
dvc.push()
|
||||
assert set(default.all()) == {
|
||||
"f97c5d29941bfb1b2fdab0874906ab82",
|
||||
"6b18131dc289fd37006705affe961ef8.dir",
|
||||
"b8a9f715dbb64fd5c56e7783c6820a61",
|
||||
}
|
||||
assert set(for_foo.all()) == expected
|
||||
assert set(for_bar.all()) == {"37b51d194a7513e45b56f6524f2d51f2"}
|
||||
|
||||
clean(["foo", "bar", "data"], dvc)
|
||||
|
||||
# pull foo and data from for_foo remote
|
||||
dvc.pull(remote="for_foo", allow_missing=True)
|
||||
|
||||
assert set(dvc.cache.local.all()) == expected
|
||||
|
||||
|
||||
def test_pull_allow_missing(tmp_dir, dvc, local_remote):
|
||||
dvc.stage.add(name="bar", outs=["bar"], cmd="echo bar > bar")
|
||||
|
||||
@@ -592,3 +646,35 @@ def test_pull_allow_missing(tmp_dir, dvc, local_remote):
|
||||
|
||||
stats = dvc.pull(allow_missing=True)
|
||||
assert stats["fetched"] == 1
|
||||
|
||||
|
||||
def test_pull_granular_excluding_import_that_cannot_be_pulled(
|
||||
tmp_dir, dvc, local_remote, mocker
|
||||
):
|
||||
"""Regression test for https://github.com/iterative/dvc/issues/10309."""
|
||||
|
||||
mocker.patch("dvc.fs.dvc._DVCFileSystem", side_effect=CloneError("SCM error"))
|
||||
(stage,) = tmp_dir.dvc_gen({"dir": {"foo": "foo", "bar": "bar"}})
|
||||
imp_stage = dvc.imp(
|
||||
"https://user:[email protected]/iterative/dvc.git",
|
||||
"dir",
|
||||
out="new_dir",
|
||||
rev="HEAD",
|
||||
no_exec=True,
|
||||
)
|
||||
dvc.push()
|
||||
|
||||
shutil.rmtree("dir")
|
||||
dvc.cache.local.clear()
|
||||
|
||||
assert dvc.pull(stage.addressing) == {
|
||||
"added": [join("dir", "")],
|
||||
"deleted": [],
|
||||
"modified": [],
|
||||
"fetched": 3,
|
||||
}
|
||||
|
||||
with pytest.raises(CloneError, match="SCM error"):
|
||||
dvc.pull()
|
||||
with pytest.raises(CloneError, match="SCM error"):
|
||||
dvc.pull(imp_stage.addressing)
|
||||
|
||||
@@ -412,3 +412,63 @@ def test_collect(tmp_dir, dvc):
|
||||
|
||||
with pytest.raises(DatasetNotFoundError, match=r"^dataset not found$"):
|
||||
dvc.datasets["not-existing"]
|
||||
|
||||
|
||||
def test_parametrized(tmp_dir, dvc):
|
||||
(tmp_dir / "dvc.yaml").dump(
|
||||
{
|
||||
"datasets": [
|
||||
{"name": "${ds1.name}", "url": "${ds1.url}", "type": "dvcx"},
|
||||
{
|
||||
"name": "${ds2.name}",
|
||||
"url": "${ds2.url}",
|
||||
"type": "dvc",
|
||||
"path": "${ds2.path}",
|
||||
},
|
||||
{
|
||||
"name": "${ds3.name}",
|
||||
"url": "${ds3.url}",
|
||||
"type": "url",
|
||||
},
|
||||
]
|
||||
}
|
||||
)
|
||||
(tmp_dir / "params.yaml").dump(
|
||||
{
|
||||
"ds1": {"name": "dogs", "url": "dvcx://dogs"},
|
||||
"ds2": {
|
||||
"name": "example-get-started",
|
||||
"url": "[email protected]:iterative/example-get-started.git",
|
||||
"path": "path",
|
||||
},
|
||||
"ds3": {
|
||||
"name": "cloud-versioning-demo",
|
||||
"url": "s3://cloud-versioning-demo",
|
||||
},
|
||||
}
|
||||
)
|
||||
|
||||
path = (tmp_dir / "dvc.yaml").fs_path
|
||||
assert dict(dvc.datasets.items()) == {
|
||||
"dogs": DVCXDataset(
|
||||
manifest_path=path,
|
||||
spec=DatasetSpec(name="dogs", url="dvcx://dogs", type="dvcx"),
|
||||
),
|
||||
"example-get-started": DVCDataset(
|
||||
manifest_path=path,
|
||||
spec=DVCDatasetSpec(
|
||||
name="example-get-started",
|
||||
url="[email protected]:iterative/example-get-started.git",
|
||||
path="path",
|
||||
type="dvc",
|
||||
),
|
||||
),
|
||||
"cloud-versioning-demo": URLDataset(
|
||||
manifest_path=path,
|
||||
spec=DatasetSpec(
|
||||
name="cloud-versioning-demo",
|
||||
url="s3://cloud-versioning-demo",
|
||||
type="url",
|
||||
),
|
||||
),
|
||||
}
|
||||
|
||||
@@ -297,7 +297,7 @@ def test_gc_rev_num(tmp_dir, scm, dvc):
|
||||
def test_date(tmp_dir, scm, dvc):
|
||||
tmp_dir.dvc_gen("testfile", "content", commit="add testfile")
|
||||
|
||||
now = datetime.datetime.now()
|
||||
now = datetime.datetime.now(tz=datetime.timezone.utc)
|
||||
datestamp = (now.date() + datetime.timedelta(days=1)).isoformat()
|
||||
|
||||
tmp_dir.dvc_gen("testfile", "modified", commit="modified")
|
||||
|
||||
@@ -1,5 +1,4 @@
|
||||
import pytest
|
||||
from dvc_studio_client import env, post_live_metrics
|
||||
from funcy import first
|
||||
|
||||
from dvc.env import (
|
||||
@@ -12,6 +11,7 @@ from dvc.env import (
|
||||
from dvc.repo import Repo
|
||||
from dvc.testing.scripts import COPY_SCRIPT
|
||||
from dvc.utils.studio import get_subrepo_relpath
|
||||
from dvc_studio_client import env, post_live_metrics
|
||||
|
||||
|
||||
@pytest.mark.studio
|
||||
|
||||
@@ -1,4 +1,5 @@
|
||||
import pytest
|
||||
|
||||
from dvc_ssh.tests.cloud import SSH, TEST_SSH_KEY_PATH, TEST_SSH_USER
|
||||
|
||||
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
from datetime import datetime
|
||||
from datetime import datetime, timezone
|
||||
|
||||
import pytest
|
||||
|
||||
@@ -15,7 +15,7 @@ from dvc.cli import main
|
||||
),
|
||||
(
|
||||
{"name": "mydataset", "url": "dvcx://dataset", "type": "dvcx"},
|
||||
{"rev_lock": "0" * 40, "version": 1, "created_at": datetime.now()},
|
||||
{"version": 1, "created_at": datetime.now(tz=timezone.utc)},
|
||||
"Adding mydataset (dvcx://dataset @ v1)\n",
|
||||
),
|
||||
(
|
||||
@@ -65,7 +65,7 @@ def test_add_already_exists(dvc, caplog, mocker):
|
||||
),
|
||||
(
|
||||
{"name": "mydataset", "url": "dvcx://dataset", "type": "dvcx"},
|
||||
{"rev_lock": "0" * 40, "version": 1, "created_at": datetime.now()},
|
||||
{"version": 1, "created_at": datetime.now(tz=timezone.utc)},
|
||||
{"version": 2},
|
||||
{
|
||||
"missing": "Updating mydataset (dvcx://dataset @ v2)\n",
|
||||
@@ -75,7 +75,7 @@ def test_add_already_exists(dvc, caplog, mocker):
|
||||
),
|
||||
(
|
||||
{"name": "mydataset", "url": "dvcx://dataset", "type": "dvcx"},
|
||||
{"rev_lock": "0" * 40, "version": 2, "created_at": datetime.now()},
|
||||
{"version": 2, "created_at": datetime.now(tz=timezone.utc)},
|
||||
{"version": 1},
|
||||
{
|
||||
"missing": "Updating mydataset (dvcx://dataset @ v1)\n",
|
||||
|
||||
@@ -166,13 +166,13 @@ def test_experiments_status(dvc, scm, mocker, capsys):
|
||||
{
|
||||
"rev": "c61a525a4ff39007301b4516fb6e54b323a0587b",
|
||||
"name": "I40",
|
||||
"timestamp": datetime(2022, 6, 9, 20, 49, 48),
|
||||
"timestamp": datetime(2022, 6, 9, 20, 49, 48), # noqa: DTZ001
|
||||
"status": "Queued",
|
||||
},
|
||||
{
|
||||
"rev": "8da9c339da30636261a3491a90aafdb760a4168f",
|
||||
"name": "I60",
|
||||
"timestamp": datetime(2022, 6, 9, 20, 49, 43),
|
||||
"timestamp": datetime(2022, 6, 9, 20, 49, 43), # noqa: DTZ001
|
||||
"status": "Running",
|
||||
},
|
||||
]
|
||||
|
||||
@@ -1,9 +1,9 @@
|
||||
import pytest
|
||||
from dvc_studio_client.auth import AuthorizationExpiredError
|
||||
|
||||
from dvc import env
|
||||
from dvc.cli import main
|
||||
from dvc.utils.studio import STUDIO_URL
|
||||
from dvc_studio_client.auth import AuthorizationExpiredError
|
||||
|
||||
|
||||
@pytest.fixture(autouse=True)
|
||||
|
||||
@@ -1,10 +1,10 @@
|
||||
import pytest
|
||||
from dvc_http import HTTPFileSystem, HTTPSFileSystem
|
||||
from dvc_s3 import S3FileSystem
|
||||
from dvc_ssh import SSHFileSystem
|
||||
|
||||
from dvc.config import RemoteNotFoundError
|
||||
from dvc.fs import LocalFileSystem, get_cloud_fs, get_fs_cls, get_fs_config
|
||||
from dvc_http import HTTPFileSystem, HTTPSFileSystem
|
||||
from dvc_s3 import S3FileSystem
|
||||
from dvc_ssh import SSHFileSystem
|
||||
|
||||
url_cls_pairs = [
|
||||
("s3://bucket/path", S3FileSystem),
|
||||
|
||||
@@ -1,10 +1,10 @@
|
||||
import pytest
|
||||
from dvc_s3 import S3FileSystem
|
||||
|
||||
from dvc import output
|
||||
from dvc.fs import LocalFileSystem
|
||||
from dvc.output import Output
|
||||
from dvc.stage import Stage
|
||||
from dvc_s3 import S3FileSystem
|
||||
|
||||
|
||||
@pytest.mark.parametrize(
|
||||
|
||||
@@ -1,8 +1,8 @@
|
||||
import pytest
|
||||
from dvc_gs import GSFileSystem
|
||||
from dvc_s3 import S3FileSystem
|
||||
|
||||
from dvc.fs import get_cloud_fs
|
||||
from dvc_gs import GSFileSystem
|
||||
from dvc_s3 import S3FileSystem
|
||||
|
||||
|
||||
def test_remote_with_hash_jobs(dvc):
|
||||
|
||||
@@ -1,7 +1,7 @@
|
||||
import pytest
|
||||
from dvc_webdav import WebDAVFileSystem, WebDAVSFileSystem
|
||||
|
||||
from dvc.fs import get_cloud_fs
|
||||
from dvc_webdav import WebDAVFileSystem, WebDAVSFileSystem
|
||||
from tests.utils.asserts import issubset
|
||||
|
||||
url_fmt = "{scheme}://{user}@example.com/public.php/webdav"
|
||||
|
||||
@@ -1,5 +1,6 @@
|
||||
import pytest
|
||||
import requests
|
||||
|
||||
from dvc_webhdfs import WebHDFSFileSystem
|
||||
|
||||
host = "host"
|
||||
|
||||
@@ -189,13 +189,13 @@ def test_queue_status(test_queue, scm, mocker):
|
||||
|
||||
def resolve_commit(rev):
|
||||
if rev == "active":
|
||||
commit_time = datetime(2022, 8, 7).timestamp()
|
||||
commit_time = datetime(2022, 8, 7).timestamp() # noqa: DTZ001
|
||||
elif rev == "queued":
|
||||
commit_time = datetime(2022, 8, 6).timestamp()
|
||||
commit_time = datetime(2022, 8, 6).timestamp() # noqa: DTZ001
|
||||
elif rev == "failed":
|
||||
commit_time = datetime(2022, 8, 5).timestamp()
|
||||
commit_time = datetime(2022, 8, 5).timestamp() # noqa: DTZ001
|
||||
elif rev == "success":
|
||||
commit_time = datetime(2022, 8, 4).timestamp()
|
||||
commit_time = datetime(2022, 8, 4).timestamp() # noqa: DTZ001
|
||||
return mocker.Mock(commit_time=commit_time)
|
||||
|
||||
mocker.patch.object(
|
||||
@@ -230,24 +230,24 @@ def test_queue_status(test_queue, scm, mocker):
|
||||
"name": "foo",
|
||||
"rev": "active",
|
||||
"status": "Running",
|
||||
"timestamp": datetime(2022, 8, 7, 0, 0, 0),
|
||||
"timestamp": datetime(2022, 8, 7, 0, 0, 0), # noqa: DTZ001
|
||||
},
|
||||
{
|
||||
"name": None,
|
||||
"rev": "queued",
|
||||
"status": "Queued",
|
||||
"timestamp": datetime(2022, 8, 6, 0, 0, 0),
|
||||
"timestamp": datetime(2022, 8, 6, 0, 0, 0), # noqa: DTZ001
|
||||
},
|
||||
{
|
||||
"name": "bar",
|
||||
"rev": "failed",
|
||||
"status": "Failed",
|
||||
"timestamp": datetime(2022, 8, 5, 0, 0, 0),
|
||||
"timestamp": datetime(2022, 8, 5, 0, 0, 0), # noqa: DTZ001
|
||||
},
|
||||
{
|
||||
"name": "foobar",
|
||||
"rev": "success",
|
||||
"status": "Success",
|
||||
"timestamp": datetime(2022, 8, 4, 0, 0, 0),
|
||||
"timestamp": datetime(2022, 8, 4, 0, 0, 0), # noqa: DTZ001
|
||||
},
|
||||
]
|
||||
|
||||
@@ -22,7 +22,7 @@ def test_collect_stable_sorting(dvc, scm, mocker):
|
||||
]
|
||||
|
||||
def collect_queued_patched(_, baseline_revs) -> dict[str, list["ExpRange"]]:
|
||||
single_timestamp = datetime.datetime(2023, 6, 20, 0, 0, 0)
|
||||
single_timestamp = datetime.datetime(2023, 6, 20, 0, 0, 0) # noqa: DTZ001
|
||||
|
||||
exp_ranges = [
|
||||
ExpRange(
|
||||
|
||||
@@ -68,7 +68,7 @@ def test_iter_revs(tmp_dir, scm, mocker):
|
||||
if rev == rev_root:
|
||||
return GitCommit(
|
||||
"dummy",
|
||||
commit_time=datetime(2022, 6, 28).timestamp(),
|
||||
commit_time=datetime(2022, 6, 28).timestamp(), # noqa: DTZ001
|
||||
commit_time_offset=0,
|
||||
message="dummy",
|
||||
parents=["dummy"],
|
||||
@@ -76,14 +76,14 @@ def test_iter_revs(tmp_dir, scm, mocker):
|
||||
committer_email="dummy",
|
||||
author_name="dummy",
|
||||
author_email="dummy",
|
||||
author_time=datetime(2022, 6, 28).timestamp(),
|
||||
author_time=datetime(2022, 6, 28).timestamp(), # noqa: DTZ001
|
||||
author_time_offset=0,
|
||||
)
|
||||
if rev == rev_old:
|
||||
raise SCMError
|
||||
return GitCommit(
|
||||
"dummy",
|
||||
commit_time=datetime(2022, 6, 30).timestamp(),
|
||||
commit_time=datetime(2022, 6, 30).timestamp(), # noqa: DTZ001
|
||||
commit_time_offset=0,
|
||||
message="dummy",
|
||||
parents=["dummy"],
|
||||
@@ -91,7 +91,7 @@ def test_iter_revs(tmp_dir, scm, mocker):
|
||||
committer_email="dummy",
|
||||
author_name="dummy",
|
||||
author_email="dummy",
|
||||
author_time=datetime(2022, 6, 28).timestamp(),
|
||||
author_time=datetime(2022, 6, 28).timestamp(), # noqa: DTZ001
|
||||
author_time_offset=0,
|
||||
)
|
||||
|
||||
|
||||
@@ -23,7 +23,8 @@ colors = {
|
||||
@pytest.fixture
|
||||
def dt(mocker):
|
||||
mocker.patch(
|
||||
"time.time", return_value=time.mktime(datetime(2020, 2, 2).timetuple())
|
||||
"time.time",
|
||||
return_value=time.mktime(datetime(2020, 2, 2).timetuple()), # noqa: DTZ001
|
||||
)
|
||||
return "2020-02-02 00:00:00,000"
|
||||
|
||||
|
||||
@@ -47,7 +47,7 @@ def test_write_json(capsys, mocker, isatty, expected_output):
|
||||
|
||||
console = Console(enable=True)
|
||||
mocker.patch.object(console, "isatty", return_value=isatty)
|
||||
message = {"hello": "world", "date": datetime.datetime(1970, 1, 1)}
|
||||
message = {"hello": "world", "date": datetime.datetime(1970, 1, 1)} # noqa: DTZ001
|
||||
console.write_json(message, default=str)
|
||||
captured = capsys.readouterr()
|
||||
assert captured.out == expected_output
|
||||
|
||||
@@ -43,9 +43,7 @@ def test_should_return_false_when_base_path_is_symlink(mocker):
|
||||
target_path = os.path.join(base_path, "bar")
|
||||
|
||||
def base_path_is_symlink(path):
|
||||
if path == base_path:
|
||||
return True
|
||||
return False
|
||||
return path == base_path
|
||||
|
||||
mocker.patch.object(
|
||||
system,
|
||||
|
||||
Reference in New Issue
Block a user