Commit Graph
3851 Commits
Author SHA1 Message Date
Aman Sharma cffc9c8ed9 Remove unnecessary wrapping of path 2019-11-03 02:38:50 +05:30
Aman Sharma d454cb8637 Modify test to check for directory as well 2019-11-03 02:23:46 +05:30
Aman Sharma f4f9f3aac1 Replace path with path_info 2019-11-02 01:15:17 +05:30
Aman Sharma b9a17752e3 Test acceptable path types of get_mtime_and_size 2019-10-31 00:30:54 +05:30
Ruslan Kuprieiev e623c4faf7 dvc: bump to 0.66.2 0.66.2 2019-10-30 17:20:05 +02:00
Ivan ShchekleinandRuslan Kuprieiev 2ec0aa0c37 failing while pulling imported directories (#2692)
* pull: fix-2684 - failing while pulling imported directories

* pull: fix-2684 - fix code indentation

* minor imported directories pull test update

Co-Authored-By: Ruslan Kuprieiev <[email protected]>
2019-10-30 17:18:07 +02:00
Alexander Schepanovski 77fcd49695 dvc: fix tqdm dep (#2694)
tqdm==4.35.0 was throwing KeyError: 'percentage'.
2019-10-30 16:43:18 +02:00
Ruslan Kuprieiev 877e38551e lock: add a workaround for a flufl.lock bug (#2688)
This bug doesn't affect us during regular dvc CLI commands, but is not
visualy pleasing during API usage.

Fixes #2573
2019-10-29 20:54:56 +02:00
Jorge Orpinel a48481b01f dvc: change ` for ' in dynamic parts of output messages (#2644)
* dvc: change ` for ' in dinamic parts of DVC outputs

per https://github.com/iterative/dvc/pull/2644#issuecomment-545151398

* dvc: use ' for dynamic output and ` for DVC names

per https://github.com/iterative/dvc/pull/2644#discussion_r338417698
2019-10-28 22:00:53 +02:00
Sagun Karanjit 5d6918a04c Remove --all-commits options from usage output (#2682)
* Comment out --all-commits optional arg

* Suppress --all-commits optional arg
2019-10-28 17:27:34 +02:00
Aman Sharma 5f644745c7 Write test for get_inode (#2673) 2019-10-28 16:43:47 +02:00
Ruslan Kuprieiev b9c7d88fcc dvc: bump to 0.66.1 0.66.1 2019-10-26 23:36:13 +03:00
Ruslan Kuprieiev 64f78c164d Revert "Added path.lstrip for / in imports (#2651)" (#2675)
This reverts commit bfc0a3596f.
2019-10-26 23:35:22 +03:00
Ruslan Kuprieiev 1baf020de7 s3: don't use walk_files for list_cache_paths
No need to convert back and forth from string to PathInfo
2019-10-26 00:29:23 +03:00
Ruslan Kuprieiev 1ab9319682 gs: fix typo 0.66.0 2019-10-25 23:24:43 +03:00
Ruslan Kuprieiev 32ba773aee s3: don't forget to convert to regular path strings 2019-10-25 23:07:17 +03:00
Ruslan Kuprieiev fc485581f9 dvc: bump to 0.66.0 2019-10-25 22:46:50 +03:00
Ruslan Kuprieiev f3bacb7c28 gs: retry upload with smaller chunk size (#2661)
Default chunk size for gs is 100M, which might be too much for
particular network. So if we are getting ConnectionError, we
should try lowering the chunk size until we reach the minimum
allowed chunk size of 256K. Also note that `chunk_size` must be a
multiple of 256K per the API specification.

Fixes #2572
2019-10-25 22:45:54 +03:00
Sanket Saurav 88f45c2348 Exclude compat files from DeepSource analysis (#2670)
Hi team,

I just [noticed](https://github.com/iterative/dvc/pull/2548#issuecomment-536255251) that there are could be quite a number of false-positives in `dvc/utils/compat.py` because of, well, the things we have to do for compatibility. I would recommend adding that file to `exclude_patterns` to prevent the noise. I've proposed that in this PR.

We've seen some other projects report this as well, and we're working on proactively suggesting this via the product UI to make it easier.

Hope this helps!

Best,
Sanket
Founder, DeepSource
2019-10-25 15:28:09 +03:00
Mr. Outis 27b63e2674 s3: support for directories (#2619)
* s3: list_objects -> list_objects_api

* s3: use path_info for _list_paths

* s3: separate _list_paths from _list_objects

* s3: support max items for listing objects/paths

* s3: take into account directories on `exists`

* s3: overwrite `isdir` method

* s3: custom collect directory entry for s3

* s3: strip checksum when collecting directories

* remote: change walk implementation to walk_files

* s3: add comment about isdir logic

* s3: use `dir_path` correctly on `isdir`

* tests: add a few unit tests for S3

* s3: use path_info join instead of posixpath

* tests: use parametrize for s3 tests

* remote: use posixpath accordingly

* tests: remove undeeded AWS variables from S3 test

* tests: rearrange parametrize values for readability

* tests: add encoding, use a single s3 instance, for loop instead of parameterize

* py2: fix encoding
2019-10-25 03:41:04 +03:00
Ruslan Kuprieiev 35499faa7d readme: remove brew cask and update brew install cmd 2019-10-25 01:41:46 +03:00
Casper da Costa-Luis 9ce3b0c50c add: output improvements (#2546)
* some doc improvements

* add: intermediate progress

* update after rebase

* linting

* fix checksum progress cleanup by ensuring gc

* progress-aware logger.info

* re-fix checksum pbar closure

* multi-file add

* make stage.dump() less verbose.

TODO: check all instances of stage.dump and possibly make verbose

* decrease verbosity of checksum calculations

* leave dvc.add stats

* update/fix logger tests

* minor doc reword

Co-Authored-By: Ruslan Kuprieiev <[email protected]>

* tidy API target_;list => targets

- as per https://github.com/iterative/dvc/pull/2546#discussion_r337042535

* tidy RecursiveAddingWhileUsingFilename message duplication

- fixes https://github.com/iterative/dvc/pull/2546#discussion_r337044670

* minor logging uncomment

- fixes https://github.com/iterative/dvc/pull/2546#discussion_r337051097

* minor doc improvements

- https://github.com/iterative/dvc/pull/2546#discussion_r337116255
- https://github.com/iterative/dvc/pull/2546#discussion_r337116809

* tidy exception

- fixes https://github.com/iterative/dvc/pull/2546#discussion_r337434142

* minor doc update

- fixes https://github.com/iterative/dvc/pull/2546/files#r337294491
- related to https://github.com/iterative/dvc.org/issues/719

* Adding => add

- fixes https://github.com/iterative/dvc/pull/2546#discussion_r337037137

* various review fixes

- minor comment as per
  https://github.com/iterative/dvc/pull/2546#discussion_r337927837
- revert warning style fix
  https://github.com/iterative/dvc/pull/2546#discussion_r338046035
- Abstract error consistency
  https://github.com/iterative/dvc/pull/2546#discussion_r337931070
- minor comment as per
  https://github.com/iterative/dvc/pull/2546#discussion_r338254958

* remove diabling progress option

- fixes https://github.com/iterative/dvc/pull/2546#discussion_r338314050
2019-10-25 01:09:19 +03:00
Ruslan Kuprieiev 3667830c2a dvc: bump to 0.65.0 0.65.0 2019-10-24 23:41:43 +03:00
Ruslan Kuprieiev 8d9e4ca934 graph: use find_cycle instead of simple_cycle (#2668)
We are incorrectly using `simple_cycle` here, `find_cycle` is much more
suitable for this application and much faster too. For example:

```
$ cat test_networkx.py
import networkx as nx
from dvc.repo.graph import check_acyclic

G = nx.scale_free_graph(1200)

list(nx.find_cycle(G, orientation='ignore'))

list(nx.simple_cycles(G))

$ python -mcProfile -scumtime test_networkx.py &> log.log
```

shows ~100s for `simple_cycles` and ~0s for `find_cycle`.

Fixes #2666
2019-10-24 23:41:11 +03:00
Casper da Costa-Luis ed1f643a6e ssh credential prompt before progress (#2660)
* ssh credential prompt before progress

* clean up ssh cred handling

- fixes https://github.com/iterative/dvc/pull/2660#discussion_r338536169
2019-10-24 19:14:07 +03:00
Ruslan Kuprieiev 24ed639901 setup: add upper limit for tqdm version
https://github.com/iterative/dvc/issues/2659#issuecomment-545940739
2019-10-24 17:29:53 +03:00
Ruslan Kuprieiev b8d1ec204c dvc: bump to 0.64.1 0.64.1 2019-10-24 17:15:30 +03:00
Casper da Costa-Luis 6f068857cb Desc fix (#2663)
* fix zero-width desc again

- fixes #2659

* correctly use tqdm API
2019-10-24 17:05:52 +03:00
Ruslan Kuprieiev 8d067c8805 setup: update project url 2019-10-24 15:19:04 +03:00
Dashamir Hoxha 7879c7cb31 Update URLs by replacing /contributing with /contributing/code (#2657)
* Update URLs by replacing /contributing with /contributing/code

* Rename contributing/code to contributing/core
2019-10-24 02:12:39 +03:00
Ruslan Kuprieiev bd5a8a5cef dvc: bump to 0.64.0 0.64.0 2019-10-23 22:48:33 +03:00
Ruslan Kuprieiev 480a612da4 output: base: don't forget to return empty cache (#2656)
* output: base: don't forget to return empty cache

CC @Suor

Fixes https://gist.github.com/leimbernon/21924e02a998e3f1604990f8a7824c37

Signed-off-by: Ruslan Kuprieiev <[email protected]>

* gc: add test for missing .dir cache file
2019-10-23 22:47:50 +03:00
Alexander Schepanovski 86811aac20 imp: dedup and parallelize fetching imported deps (#2654)
* imp: dedup and parallelize external fetches

This prevents same fetches for external artifacts, groups them by source
and fetches in parallel.

* imp: test that fetch works on non workspace deps
2019-10-23 18:02:50 +03:00
Alexander Schepanovski 30341438e0 gc: added --all-commits (#2643)
* dvc: fix branch suffixes in status/push/pull

* gc: add --all-commits flag

* gc: fix gc warning

Say that we always leave things used in the working tree
2019-10-23 18:00:31 +03:00
Srividya Krishnakumar bfc0a3596f Added path.lstrip for / in imports (#2651) 2019-10-23 03:54:10 +03:00
Ruslan Kuprieiev a0d364e78a version: fix warning 2019-10-22 23:21:22 +03:00
Ruslan Kuprieiev 878998433f dvc: bump to 0.63.4 0.63.4 2019-10-22 01:26:02 +03:00
Ruslan Kuprieiev 763bfb4734 http: reuse requests.Session (#2646)
This way we are able to properly utilize automatic connection pools and
not create new fds for each request, which overflows ulimit for max fds
very quickly on mac and windows. Kudos @pared for investigating 🎉

Fixes #2600

Signed-off-by: Ruslan Kuprieiev <[email protected]>
2019-10-22 00:54:29 +03:00
Ruslan Kuprieiev 2274261808 progress: enable progress bar if it is a TTY
Fixes #2645
2019-10-21 23:35:47 +03:00
Ruslan Kuprieiev 3043ed2cb9 lock: skip using slow getaddrinfo (#2642)
This is basically Lock.__init__ copy-paste, except that
instead of using `socket.getfqdn()` we use `socket.gethostname()`
to speed this up. We've seen [1] `getfqdn()` take ~5sec to return
anything, which is way too slow. `gethostname()` is actually a
fallback for `getfqdn()` when it is not able to resolve a
canonical hostname through network. The claimfile that uses
`self._hostname` is still usable, as it uses `pid` and random
number to generate the resulting lock file name, which is unique
enough for our application.

[1] https://github.com/iterative/dvc/issues/2582

Fixes #2582
2019-10-21 19:20:08 +03:00
Ruslan Kuprieiev 59e62a7227 checkout: accept multiple targets (#2640)
Make `Repo.checkout` accept a list of targets, instead of having to feed
it targets one-by-one. This allows us to properly handle checkout
errors.

Fixes #2580
2019-10-21 17:06:21 +03:00
Alexander Schepanovski 33b0eefec0 dvc: dedup used cache (#2630)
* dvc: dedup used cache

This is a preparation step to make garbage collector work with more
commits. It has a value of its own:
- less exists calls to show cloud status or prepare push/pull
- same names are not repeated in status and pbar texts

* dvc: delay checksum names concatenation
2019-10-21 12:12:56 +03:00
Alexander Schepanovski 1f58fc6f42 dvc: dedup brancher (#2639) 2019-10-20 17:32:42 +03:00
Casper da Costa-Luis 1e01ce3ac9 isatty (#2550)
* suppress Tqdm when isatty

- fixes #2549

* fix tests

* unconditionally disable Tqdm if not isatty

- fixes https://github.com/iterative/dvc/pull/2550#discussion_r329386950

* add TQDM_DISABLE env var

- update tests
- add documentation

* TQDM_DISABLE => TQDM_ISATTY

* tests: mock.patch sys.stderr

* TQDM_ISATTY => DVC_ISATTY

as per https://github.com/iterative/dvc/pull/2550#discussion_r334565120

* dvc.progress.Tqdm file kwarg

- fixes https://github.com/iterative/dvc/pull/2550/files/ad1f245107c405697c4b61fe58a92fc0265c6588#r335706955

* dynamic env DVC_ISATTY

- fixes
  https://github.com/iterative/dvc/pull/2550/files/ad1f245107c405697c4b61fe58a92fc0265c6588#r335811454

* DVC_ISATTY in tests

- fixes https://github.com/iterative/dvc/pull/2550/files/ad1f245107c405697c4b61fe58a92fc0265c6588#r335811099

* re-add and abstract `env2bool` to `dvc.utils`

- partially reverts commit 524a0df188f566fb3e103f6965f1b6ac9c530886
- fixes
  https://github.com/iterative/dvc/pull/2550/files/ad1f245107c405697c4b61fe58a92fc0265c6588#r335811639

* env2bool tidy

* rename DVC_ISATTY => DVC_IGNORE_ISATTY

- fixes https://github.com/iterative/dvc/pull/2550#discussion_r335947382
2019-10-20 00:54:06 +03:00
Nabanita Dash a0cac4a3c8 changed order of imports (#2636) 2019-10-19 01:14:24 +03:00
Nabanita Dash 3eabb65781 corrected import order (#2634) 2019-10-19 00:32:45 +03:00
Ruslan Kuprieiev 638aaa254e dvc: bump to 0.63.3 0.63.3 2019-10-18 14:32:16 +03:00
Ruslan Kuprieiev 566d7b48d0 lock: monkeypatch socket.getfqdn used by flufl.lock (#2628)
Workaround for slow and obsoleted gethostbyaddr used in
`socket.getfqdn()`. See [1], [2] and [3] for more info.

[1] https://bugs.python.org/issue5004
[2] https://github.com/iterative/dvc/issues/2582
[3] https://gitlab.com/warsaw/flufl.lock/merge_requests/12

Flufl.lock guys seem unresponsive, so we have to monkeypatch
this by ourselves, at least for now.

Fixes #2582
2019-10-18 12:32:22 +03:00
Ruslan Kuprieiev 25ff08fdc8 dvc: bump to 0.63.2 0.63.2 2019-10-17 23:13:02 +03:00
Casper da Costa-Luis 8eb520f516 fix ncols_desc=0 (#2627)
- fixes #2598
2019-10-17 23:11:47 +03:00