* Migrate to ossfs
fix 6177
* Add verification to object stored on oss
* Change the oss remote's dependency.
pass all of the tests
* Performance optimaztion and ossfs version update
* Remove the argument to set the resumable get/put
1. Experiments shows resumable get/put has little influnence on performance.
2. Just use resumable ones as default
* Use a new api for performance optimization
* Without filesize progress bar version
* With progress bar version
* Bump and add comments
1. Bump ossfs from 2021.6.2 to 2021.7.0
2. add some comments to the verification trigger
* Change the name of kwrags following parent class.
* Bump to new ossfs and rewrite upload_fobj
Because some problem with oss-emulater
1. bump to ossfs 2021.7.1
2. rewrite upload_fobj
* Optimization on rm_files
* Some optimization follow the old version.
* Update dvc/fs/oss.py
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* Update dvc/objects/db/oss.py
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* bump into ossfs 2021.7.2
* Bump into ossfs 2021.7.3OC
* Switch to real_oss_server
* Switch to a real oss server
* Use the oss bucket located in US.
* Remove some emulator related code
* Add envs to ci
* remove some oss pytest XFAIL
Because we didn't use emulator, we can remove some pytest XFAILs
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* fs: use fsspecwrapper in memfs
* odb: add memfs staging ODB in ODBManager
* odb: add read_only attribute for odb instances
* objects: handle memfs paths when staging trees
* odb: remove git ODB
* output: use staging ODB
* RepoDependency: use staging odb for imports
* dvcfs: handle case where dir cache is unavailable
* fix circular import check
* odb: use temp local ODB for staging
* objects: use staging ODB in stage() and tree load
* objects: add typing for add/check/load/stage
* output/dep: use new staging
* add unit tests for local odb staging
* localfs: account for string paths in move()
* include local in odb.by_scheme
* tests: count dir cache like any other object in test_pull_git_imports
* odb: clear staging on gc()
* objects: add tree.get/filter/insert
* output: use obj.filter/get for granular dir commit
* squash filter logic output
* dependency: don't filter imports at the dep level
* don't init staging ODB for external cache
* use staging ODB when computing tree hash for external outs
* remove unneeded force in test granular commit
* use unique-per-manager memfs URLs for staging
* odb: make staging per-ODBManager
* objects: move state dependent staging into ODBManager
* objects: support checking multiple odbs
- staging dependent checks can be done via ODBManager.check
* checkout: do state lookup before explicit stage() in _changed()
* output: use odbmanager based staging
* RepoDependency: use odbmanager based staging
* update obj staging unit tests
* checkout: remove check(), handle individual file exceptions on link()
* diff: use odbmanager based staging
* objects: add ObjectPermissionError for read/write perm errors
* odb: move staging out of odbmanager
* objects: handle staging ODB in objects.stage()
* objects.tree: don't stage anything in tree methods
* odb: clear staged objects on gc()
* remote: don't filter objs by scheme, objs are already grouped by ODB
* diff: update objects.stage usage
* output/dep: update stage() usage
* update ODB tests
* update func tests
* remove memfs from FS_MAP
* revert unneeded objects.check() changes
* remove unused tree.insert()
* revert unused odbmanager changes
* add separate odb error classes
* stage external outs directly in ODB
* check for obj existence in main ODB before staging
* use .dvc/tmp/staging instead of per-odb staging
* gc: only gc loal staging once
* objects: add ExternalRepoFile object type
* RepoDependency: implement get_obj (use ExternalRepoFile)
* drop distinction between used external and used objects
* update tests
* remove unneeded fetch from ExternalRepoFile
* wrap erepo errors as an object error
* update cloud/remote functions for new used_objs behavior
* fix update() rev/locked behavior
* update import tests
* remove ExternalRepoFile
* move get_obj and get_used_objs implementations back into repo dependency
* return objects plus associated ODB (remote) in get_used_objs
* odb: add tmp_dir field and support creating Remote from an odb
* return dict mapping odb -> objects in get_used_objs
* use dummy git odb for git imports
* fetch: support pulling from specific odb
* update cloud funcs for get_used_objs usage
* update tests for used_objs behavior
* use fetch in dep.download
* catch circular imports from local fs repos
* add tests for chained and circular imports
* move tmp_dir into odb config
* update return docstring for repo.used_objs
* objects: make HashInfo & HashFile hashable
* stage/output: collect objects (HashFiles) instead of NamedCache
* remote/data_cloud: use objs instead of NamedCache
* repo: use objects instead of NamedCache
* rerun black after rebase
* remove NamedCache usage from run-cache
* drop NamedCache
* update HashInfo.__hash__
* update unit tests
* revert remote_name change
* start cleaning up test failures
* fix tree obj expansion
* update missing cache logging
* fix external dict handling
* update naive odb.gc
* update state save behavior for pull
* update test_data_cloud
* update test_remote
* fix gc with multiple repos
* objects.tree: support filtering w/preserved hash_info
* fix stage cache restore
* drop fs.path_info from HashFile.__hash__
* objects: add optional name attribute
* revert missing cache logging name/suffix changes
* revert name changes in remote tests
* review fixes
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
* Update dvc/remote/base.py
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
Co-authored-by: Ruslan Kuprieiev <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
* Decoupling dvcignore and fs
[x] remove dvcignore from fs objects
[x] attach dvcignore to repo
[x] add ignore check to functions(add, checkout, output, pipeline, etc)
[x] pass all tests
[x] final check
* Solve all of the arugments error.
* add dvcignore to dvc list
* Solve some test_ignore cases
* add dvcignore to checkout.
1. add dvcignore to 'checkout', 'add'
2. add ignore_filter to fs
* Solve two tests
* Get rid of ignore_filter
* Add ignore examine to download
* Solve a test issue
* Solve dvcignore and subrepo problems
* Solve sub repo error
* Revert some changes
* pass all tests
* Remove debug codes
* Some final exams
* dvcignore trie tree only update when needed
* reuse of the dir result in path walk.
* Some change after code review.
* Recover something from false `--force` push
* add abspath trans to dvcginore
* pass pylint
* pylint related
* Update dvc/fs/repo.py
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* Changes related to reviews.
* dvcignore call api change
from dvcignore.walk_files(fs.walk(path_info)) to dvcignore.walk_files(fs, path_info)
* Get rid of PathInfo in test_ignore.py
* fs.walk follow the arguments of os.walk
* Dvcignore as parameters
* pass dvcignore as arguments to checkouts
* Decoupling state and repo
* Update dvc/dvcfile.py
Co-authored-by: Paweł Redzyński <[email protected]>
* Update dvc/objects/stage.py
Co-authored-by: Paweł Redzyński <[email protected]>
* Solve some small problems
* Add tests to verify that dependency now not ignore
fix#5256
* Update dvc/ignore.py
* Update dvc/fs/git.py
* Update dvc/repo/__init__.py
* Some small improvements
* pass black
* Refactor is_ignored
* Update dvc/output/base.py
* repofs: use dvcignore in exists/isdir/isfile
Per https://github.com/iterative/dvc/pull/5812/files#r630604524
Co-authored-by: myname <[email protected]>
Co-authored-by: Ruslan Kuprieiev <[email protected]>
Co-authored-by: Paweł Redzyński <[email protected]>
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* objects: merge transfer() with stage()
* objects: drop streamfile
* objects: preserve the signature of get_file_hash
* objects: override hash_jobs if jobs= passed
* objects: support no progress bar directive
* tests: spy on _get_file_hash
* objects: update=... directive
* update: only transfer missing caches with --to-remote
* tests: remove local_remote from the primary test (due to it moves)
* objects: add move=True/False option
* objects: implement _get_file_obj on top of get_file_hash
* objects: use threading on save()
* objects: pass jobs= on to-cache as well
* objects: use in place tqdm
* objects: check for FileExistsError
* Update dvc/objects/__init__.py
Co-authored-by: Ruslan Kuprieiev <[email protected]>
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* dvc: get rid of DirInfo
DirInfo was created before we had proper objects, as a way to have a
structure that represents a staged directory. Right now we have a
dedicated Tree object that is specifically meant for that.
As a result, HashInfo no longer needs to have dir_info and we no longer
need `get_hash/get_dir_hash` helpers.
* objects: move Tree into tree.py
* state: only load when needed
* state: don't use separate load/dump
* checkout: group link removal logic together
* state: use diskcache.Cache
* staging: use pbar and save to state
* state: don't pass the whole repo to __init__
* staging: explicitly pass state object
* fs: get rid of odb property
* state: don't close the connection to cache
* repo: close: close state
We used to think this way, but state is not really an fs concept
(fsspec's dircache is though), as it is a cache of hashes of objects
that we are staging, and the hash doesn't depend on fs, as it is usually
computed by us by reading from fs.
Pre-requisite for diskcache-based state.
GaoandRuslan Kuprieiev
Peter Rowlands (변기호)
Batuhan Taskaya
Saugat Pachhai
