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Author SHA1 Message Date
David de la Iglesia Castro 9a5614d326 TabularData: Add ignore_empty flag to drop_duplicates. 
Configures whether to consider missing values as relevant or not.
 2021-12-29 21:33:36 +01:00
David de la Iglesia Castro 12a737d905 TabularData: Fix drop_duplicates for rich_text NaN. 
When filling missing values with `ui.rich_text` (i.e. in experiments show CMD), those values were not being correctly matched against `self._fill_value`)
 2021-12-29 21:33:36 +01:00
Paweł Redzyński 51a6116b92 plots: dir: handle no data in cache/remote 
Fixes: iterative/cse#4
 2021-12-29 13:21:37 +01:00
dependabot[bot] 3566b1941c build(deps-dev): Bump types-requests from 2.26.2 to 2.26.3 
Bumps [types-requests](https://github.com/python/typeshed) from 2.26.2 to 2.26.3.
- [Release notes](https://github.com/python/typeshed/releases)
- [Commits](https://github.com/python/typeshed/commits)

---
updated-dependencies:
- dependency-name: types-requests
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-29 12:53:59 +09:00
pre-commit-ci[bot] ceeda6d307 [pre-commit.ci] pre-commit autoupdate 
updates:
- [github.com/pre-commit/pre-commit-hooks: v4.0.1 → v4.1.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.0.1...v4.1.0)
 2021-12-28 15:01:38 +08:00
karajan1001 98d7f785e9 exp show: remove a useless function 
The function `_raise_error_if_all_disabled` is copyed wrongly to this
place during sub command refactoring. It used to be used in `exp gc`,
can be deleted from this function.
 2021-12-27 20:35:07 +01:00
Ruslan Kuprieiev 04e93da0bd fs: remove unused RemoteCmdError 2021-12-23 19:02:44 +02:00
Ruslan Kuprieiev 72aaca4343 odb: move verify option to config 
These options are part of the default config for each particular remote.
Plugins will define their default config on theirown, but for now we keep
those in one config schema.
 2021-12-23 12:49:16 +02:00
dependabot[bot] 60cb8322d9 build(deps-dev): Bump mypy from 0.921 to 0.930 
Bumps [mypy](https://github.com/python/mypy) from 0.921 to 0.930.
- [Release notes](https://github.com/python/mypy/releases)
- [Commits](https://github.com/python/mypy/compare/v0.921...v0.930)

---
updated-dependencies:
- dependency-name: mypy
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-23 09:50:23 +05:45
dependabot[bot] b0b9a74207 build(deps-dev): Bump wheel from 0.37.0 to 0.37.1 
Bumps [wheel](https://github.com/pypa/wheel) from 0.37.0 to 0.37.1.
- [Release notes](https://github.com/pypa/wheel/releases)
- [Changelog](https://github.com/pypa/wheel/blob/main/docs/news.rst)
- [Commits](https://github.com/pypa/wheel/compare/0.37.0...0.37.1)

---
updated-dependencies:
- dependency-name: wheel
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-23 09:50:05 +05:45
Saugat Pachhai (सौगात) 32fcc73078 deps: explicitly specify pyarrow for hdfs 2.9.3 2021-12-22 16:45:12 +02:00
Saugat Pachhai (सौगात) e3596178d4 deps: move requests-kerberos to webhdfs_kerberos extras instead of webhdfs 2021-12-22 16:44:52 +02:00
Saugat Pachhai (सौगात) ba40d91de6 fs.hdfs: skip port if not available 2021-12-22 16:43:56 +02:00
dependabot[bot] 02cfbcfc32 build(deps-dev): Bump mypy from 0.920 to 0.921 
Bumps [mypy](https://github.com/python/mypy) from 0.920 to 0.921.
- [Release notes](https://github.com/python/mypy/releases)
- [Commits](https://github.com/python/mypy/compare/v0.920...v0.921)

---
updated-dependencies:
- dependency-name: mypy
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-22 12:45:02 +02:00
dependabot[bot] 96acb64fec build(deps): Bump scmrepo from 0.0.6 to 0.0.7 
Bumps [scmrepo](https://github.com/iterative/scmrepo) from 0.0.6 to 0.0.7.
- [Release notes](https://github.com/iterative/scmrepo/releases)
- [Commits](https://github.com/iterative/scmrepo/compare/0.0.6...0.0.7)

---
updated-dependencies:
- dependency-name: scmrepo
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>

tests: fix invalid set_ref in exp func test
 2021-12-22 17:52:30 +09:00
David de la Iglesia Castro 1507a6ed99 Update benchmarks.yaml 2021-12-21 09:03:19 +05:45
Saugat Pachhai 6034f0e36a s3: remove explicit dependency on aiobotocore; simplify constraints 
Hoping to fix `dvc[s3]` installations in pipenv. Pipenv's resolver is in loop, backtracking ruamel.yaml from 0.17.17 to 0.17.11 continuously. I think this has to do
more with `s3`'s dependency than `ruamel.yaml` as it only fails here. And, we are specifying dependency in 1.0.1 whereas aiobotocore has released 2.0 versions which is what is being installed, so it's redundant anyway. I am hopeful that this may help resolver with the simplification in constraints.
 2021-12-20 14:32:42 +05:45
Saugat Pachhai 6df1ee87ab Specify bcrypt explicitly 2021-12-20 12:16:14 +05:45
dependabot[bot] a6263cffc8 build(deps-dev): Bump types-requests from 2.26.1 to 2.26.2 
Bumps [types-requests](https://github.com/python/typeshed) from 2.26.1 to 2.26.2.
- [Release notes](https://github.com/python/typeshed/releases)
- [Commits](https://github.com/python/typeshed/commits)

---
updated-dependencies:
- dependency-name: types-requests
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-20 10:37:39 +08:00
Paweł Redzyński 8ca3a7b684 fs: repo: raise proper FileNotFoundError in metadata 
Related: #7120
 2021-12-17 15:48:29 +02:00
David de la Iglesia Castro 4d5be46ab4 exp show --html: Handle fill_value. 
Adds new argument `fill_value` to ParallelCoordinatesRenderer.

For scalar columns, prevent converting to categorical by explictly inserting None when value is missing (value == fill_value).

For categorical columns, replace `fill_value` with `"Missing"` and ensure it is the last item so it gets rendered on top of the column.
 2021-12-17 14:45:12 +09:00
David de la Iglesia Castro 5ee82d4000 exp show: Add parallel coordinates plot. 
Uses `TabularData.to_parallel_coordinates`.
Adds new arguments: `html`, `out`, `open`

Reuses `--sort-by` to define colorscale.

Closes #4455
 2021-12-17 14:45:12 +09:00
David de la Iglesia Castro a5b7c5ea19 TabularData: Add to_parallel_coordinates. 
Uses `ParallelCoordinatesRenderer` and `dvc.render.html.write`.

pre-requisite #4455
 2021-12-17 14:45:12 +09:00
David de la Iglesia Castro 19b3c82698 dvc render: Add plotly parallel coords renderer 
New renderer based on plotly. Not exposed to `dvc plots`.
Generate plotly datapoints from `TabularData`.

pre-requisite #4455
 2021-12-17 14:45:12 +09:00
David de la Iglesia Castro 9bd60f62d7 exp show: Add alternating row colors and update border style. 
Use `box.HORIZONTALS`.

rich_table: Support `box.HORIZONTALS`

Closes #7128
 2021-12-17 14:31:53 +09:00
dependabot[bot] 970cbfa64e build(deps-dev): Bump mypy from 0.910 to 0.920 
Bumps [mypy](https://github.com/python/mypy) from 0.910 to 0.920.
- [Release notes](https://github.com/python/mypy/releases)
- [Commits](https://github.com/python/mypy/compare/v0.910...v0.920)

---
updated-dependencies:
- dependency-name: mypy
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-16 16:04:47 +09:00
Ruslan Kuprieiev 0bf56fe29b rename master -> main 2021-12-15 22:19:36 +02:00
Ruslan Kuprieiev 30d6839a5f diff: use relpaths 
Regression from path_info removal.

Also fixes #7147
 2021-12-15 17:27:38 +02:00
Paweł Redzyński e24de3a0f3 plots: introduce --json option 
Fixes: #7073
 2021-12-15 11:05:57 +01:00
Peter Rowlands 25ef812ecf exp: use process manager dirs for serialized executors 
- partially refactor existing pidfile behavior into using proc manager
- old pidfiles are now json-serialized executor info files placed in
  proc manager subdirs (alongside proc manager pidfile/logs/etc)
- move multiprocessing based (attached) execution into separate
  execution path from future "detached" execution support
 2021-12-15 15:55:32 +09:00
Peter Rowlands fa819b0b70 exp: refactor workspace repro into executor classes 2021-12-15 15:55:32 +09:00
Peter Rowlands 37f8010b42 exp: initial executor manager refactor 
- introduce ExecutorManager classes
- move executor init + execution from experiments.__init__ into the
  manager classes
- make executors serializable via ExecutorInfo
 2021-12-15 15:55:32 +09:00
Saugat Pachhai 8319cc50c6 Update setup.cfg 2021-12-14 21:11:28 +05:45
dependabot[bot] 98c22e3277 build(deps): Bump scmrepo from 0.0.4 to 0.0.5 
Bumps [scmrepo](https://github.com/iterative/scmrepo) from 0.0.4 to 0.0.5.
- [Release notes](https://github.com/iterative/scmrepo/releases)
- [Commits](https://github.com/iterative/scmrepo/compare/0.0.4...0.0.5)

---
updated-dependencies:
- dependency-name: scmrepo
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-14 21:11:28 +05:45
Saugat Pachhai (सौगात) 3ca8e26169 tests: get rid of GitFS related tests 
Also refactored unittest-based tests for LocalFileSystem to pytest
 2021-12-14 17:55:26 +05:45
karajan1001andPeter Rowlands 0deab0118a exp: split exp sub command (#5489) 
related to #5489
Current dvc/command/experiments.py is too long for switch between cmd class
and the argument parser.

Split the sub command in dvc/command/experiments.py to individual files

Co-authored-by: Peter Rowlands (변기호) <[email protected]>
 2021-12-14 19:16:04 +08:00
dependabot[bot] 72af8b8605 build(deps-dev): Bump pytest-timeout from 2.0.1 to 2.0.2 
Bumps [pytest-timeout](https://github.com/pytest-dev/pytest-timeout) from 2.0.1 to 2.0.2.
- [Release notes](https://github.com/pytest-dev/pytest-timeout/releases)
- [Commits](https://github.com/pytest-dev/pytest-timeout/compare/2.0.1...2.0.2)

---
updated-dependencies:
- dependency-name: pytest-timeout
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-14 16:53:58 +08:00
Saugat Pachhai (सौगात) ba4955738f tests: remove func.test_scm 2021-12-13 21:03:24 +05:45
dependabot[bot] 602713e57b build(deps-dev): Bump pytest-xdist from 2.4.0 to 2.5.0 
Bumps [pytest-xdist](https://github.com/pytest-dev/pytest-xdist) from 2.4.0 to 2.5.0.
- [Release notes](https://github.com/pytest-dev/pytest-xdist/releases)
- [Changelog](https://github.com/pytest-dev/pytest-xdist/blob/master/CHANGELOG.rst)
- [Commits](https://github.com/pytest-dev/pytest-xdist/compare/v2.4.0...v2.5.0)

---
updated-dependencies:
- dependency-name: pytest-xdist
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-13 13:39:50 +09:00
Paweł Redzyński 7250e1b336 dvc: fix installation from archives 
Fixes: #7124
2.9.2 		2021-12-11 05:49:28 +02:00
Ruslan Kuprieiev 896bbf1fc6 fs: get rid of unused DETAIL_FIELDS 2021-12-10 18:02:22 +02:00
Ruslan Kuprieiev 81eda7e2b7 fs: get rid of CHECKSUM_DIR_SUFFIX and is_dir_hash 
These are leftovers from old remotes, that clearly have nothing
to do with filesystems.
 2021-12-10 10:53:10 +02:00
Ruslan Kuprieiev 82c5caee27 setup: unpin s3fs/ossfs/gcsfs 2021-12-09 15:20:22 +02:00
Paweł Redzyński eb41b8b3e0 setup: bump gcsfs 
Related: #7053
 2021-12-09 15:20:22 +02:00
Ruslan Kuprieiev ea49fb95f7 setup: bump s3fs 
Fixes #7053
 2021-12-09 13:57:40 +02:00
dependabot[bot] e977bcc6d9 build(deps-dev): Bump dvclive[image] from 0.4.5 to 0.4.6 
Bumps [dvclive[image]](https://github.com/iterative/dvclive) from 0.4.5 to 0.4.6.
- [Release notes](https://github.com/iterative/dvclive/releases)
- [Commits](https://github.com/iterative/dvclive/compare/0.4.5...0.4.6)

---
updated-dependencies:
- dependency-name: dvclive[image]
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-08 14:32:48 +02:00
dependabot[bot] 33228b5cd4 build(deps): Bump scmrepo from 0.0.3 to 0.0.4 
Bumps [scmrepo](https://github.com/iterative/scmrepo) from 0.0.3 to 0.0.4.
- [Release notes](https://github.com/iterative/scmrepo/releases)
- [Commits](https://github.com/iterative/scmrepo/compare/0.0.3...0.0.4)

---
updated-dependencies:
- dependency-name: scmrepo
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
 2021-12-08 12:01:56 +01:00
Ruslan Kuprieiev 064fbfd0d5 webdav: fix unstrip_protocol 2.9.1 2021-12-07 23:59:12 +02:00
Ruslan Kuprieiev e8e1c76504 fs: path: use ntpath/posixpath 
This is less error-prone than implementing these methods ourselves.
2.9.0 		2021-12-07 22:58:48 +02:00
Saugat Pachhai (सौगात) 532e115782 exp init: unhide from dvc exp --help 2021-12-07 09:55:40 +05:45