* #4578 added is_user_executable to dvc file
* Addressed PR feedback and introduced test_add_executable
Also fixed all tests in test_add.py
* Added a test to checkout executable file
* Pop isexec in dvc/output/__init__.py:loadd_from
* Implement test that file is executable after checkout
* Address PR feedback
* Address PR feedback
* Changed BaseTree.isexec to use path_info as an argument
* Update tests/func/test_add.py
* Update tests/func/test_add.py
* Update tests/func/test_add.py
* Update tests/func/test_add.py
* fix formatting
* add: preserve exec
* checkout: fix setting exec
* tests: refactor checkout exec test
* tests: fix windows cases
* tests: add: fix exec test on windows
* Update dvc/tree/local.py
* Update dvc/output/base.py
* Update dvc/output/base.py
* Update dvc/cache/base.py
* Update tests/func/test_add.py
* tests: add: skip whole exec test on windows
* save isexec to lockfiles
* fix formatting
Co-authored-by: Ruslan Kuprieiev <[email protected]>
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* experiments: move executor into a module
* experiments: separate executor into base/local
* rename LocalExecutor to TempDirExecutor, run in .dvc/tmp by default
* git: restore HEAD using reset not checkout in detached_head()
* experiments: support calling BaseExecutor.reproduce directly for
workspace runs
* experiments: run single experiments in local workspace by default
* update experiments tests for workspace changes
* experiments: update checkpoints for workspace runs
* update checkpoints tests
* update test_show
* add force param for apply
* exp apply: add --force option
* exp run/res: add --temp option to force tempdir execution for single
experiments
* force apply in non-apply specific tests
* Cleanup log messages when loading stages
1. Simplified callback stage debug message
2. Reduced no lock entry message to trace
If lockfile does not have some entry, it will simply complain
that lockfile is not uptodate once.
If there is no lockfile or empty lockfile, it will complain that
lockfile not found.
3. Annoying parametrization related wdir-interpolated debug message
removed.
* Update dvc/stage/__init__.py
* black
* Skip paramdependency for vars
Previously, `configs` which was a list of PathInfo was being used
to check if the `vars` should be skipped or not.
But, the file is stored as a string that made that check redundant
which might have caused #5117 as they were being stored twice,
once as a expanded paramdependency and next as a flattened dict
from vars, which later during `flatten`, it might have panicked
from that duplication.
* Use defaultdict
* change add_vars to collect_vars
Currently, we iterate over targets manually in CLI, which results in a
complicated code and a DAG collection/check overhead. With this PR we
collect the DAG once, figure out all the needed targets within it and
just reproduce them in one pass.
* fix making too many ssh connections when pushing run cache (#4732)
* reformat
* generator should exit on GeneratorExit exception
* Update dvc/tree/ssh/__init__.py
* pool: close on Exception and not BaseException
Co-authored-by: Tomasz Łakota <[email protected]>
Co-authored-by: Ruslan Kuprieiev <[email protected]>
Co-authored-by: Ruslan Kuprieiev <[email protected]>
minor refactors, code comments
Rename interim to definitions
provide location of entry during init for definition
small fixups to set_temporarily
Refactor loop to use dict comprehension
Provide same interface for definitions
Make it work for composite lists
Check for sequence rather than a list
refactor tests
Fixes#4955Fixes#4957Fixes#4963
Currently we don't handle bad name well:
```
(dvc-3.8.3) ➜ dvc git:(config-bug) ✗ dvc config section
ERROR: unexpected error - not enough values to unpack (expected 2, got 1)
```
With this PR, we check name to conform to either `remote.name.option` or
`section.option`, so we'll give a more friendly:
```
(dvc-3.8.3) ➜ dvc git:(config-bug) ✗ dvc config section
ERROR: argument name: name argument should look like remote.name.option or section.option
usage: dvc config [-h] [--global | --system | --local] [-q | -v] [-u] [-l] [name] [value]
Get or set config options.
Documentation: <https://man.dvc.org/config>
positional arguments:
name Option name (remote.name.option or section.option).
value Option value.
optional arguments:
-h, --help show this help message and exit
--global Use global config.
--system Use system config.
--local Use local config.
-q, --quiet Be quiet.
-v, --verbose Be verbose.
-u, --unset Unset option.
-l, --list List all defined config values.
```
We try to optimize `tree.exists` calls and probably few others
in that they either look directly into the workspace or,
to the cache without running graph checks. It does not seem
to be possible just to run graph checks on `find_outs_by_path`
due to those optimizations.
So, that's why, the `collect` also does a graph check for this
reason.
Fixes#5027Fixes#4010
* experiments: add utils.exp_commits for iterating over experiment commits
* repo: add support for all_experiments in brancher and used_cache
* git: make all_commits return commits in standard refs instead of --all
* gc: add --all-experiments to preserve cache for experiments
* update gc tests
* repo: support pushing and fetching specific revs internally
* exp push: push cache for experiment by default
* exp pull: pull cache for experiment by default
* fix empty git repo bug
* [WIP] git: use dulwich for add/commit
* dulwich: add is_tracked implementation
* experiments: try to workaround windows cleanup() bug on py < 3.8
* tests: experiments: convert CRLF to LF before comparing params
* trie: updated message for OverlappingOutputsError
the message given by the exception was not verbose enough why this exception is thrown.
now gives the user more information as to why the overlapping paths should be changed.
* test_run_single_stage: fixed test TestShouldRaiseOnOverlappingOutputPaths
the test is now updated to reflect the exception message changes.
Signed-off-by: metalglove <[email protected]>
* git: remove scm from backends, make backends configurable
* git: implement get/set/remove ref in gitpython
* git: support reflog --rewrite for stash
* tests: support testing individual backends in unit/scm/test_git
* stash: create reflog if it does not exist for gitpython backend
Paweł Redzyński
Peter Rowlands (변기호)
Saugat Pachhai
Ruslan Kuprieiev
Ioana GrigoropolandRuslan Kuprieiev
João Rafael
Sandeep MistryandRuslan Kuprieiev
Batuhan Taskaya
GaoandSaugat Pachhai
Johnny Chen
metalglove