related to #5489
Current dvc/command/experiments.py is too long for switch between cmd class
and the argument parser.
Split the sub command in dvc/command/experiments.py to individual files
Co-authored-by: Peter Rowlands (변기호) <[email protected]>
After #6814 the header of `diff_table` is `a_rev/`b_rev` instead of `Old`/`New` so the name of the option was counterintuitive.
In addition, make `a_rev` show by default, for consistency with output format of other `diff_table` uses (`dvc metrics diff` / `dvc params diff`).
* Show csv format of experiments
fix#5989 and #5446
1. add --show-csv to dvc exp show
2. add a new functional test for csv format
3. add a new unit test for show_experiements
4. solve name duplication in table common headers (Created,Parent, etc... ), metrics files and param files.
Co-authored-by: Peter Rowlands (변기호) <[email protected]>
* Clean up remotes's exps
fix#6006
1. add a new argument `--git-remote` to `dvc exp remove`
2. support remote a special remote exp
3. add tests for it
4. fix #6421
5. add a test for #6421.
6. extract some functions from the `dvc pull`, `dvc push`, `dvc remove` to utils.
7. add a tests for this new util function `resolve_exp_ref`
8. add `__init__.py` to some test package for the pytest fail
Co-authored-by: Jorge Orpinel <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Dave Berenbaum <[email protected]>
* Remove all of the experiments in the workspace
fix#5676
1. remove all the experiments in workspace
2. add tests for it
* Only remove baseline ones
* Add a new arguments --all
* Update dvc/repo/experiments/remove.py
Co-authored-by: Peter Rowlands (변기호) <[email protected]>
* Rename and shortcut for these commands
* Solve the issue from removing a changing list.
* Update dvc/repo/experiments/remove.py
Co-authored-by: Peter Rowlands (변기호) <[email protected]>
* Update dvc/repo/experiments/remove.py
Co-authored-by: Peter Rowlands (변기호) <[email protected]>
* delete workspace option
Co-authored-by: Peter Rowlands (변기호) <[email protected]>
* params/metrics/plots/exp show: introduce onerror
* fixup
* plots/metrics/params: removing errors
* removing more errors
* removing errors
* some more removing
* new plots ux
* new ux for metrics
* new ux for params
* fixing tests
* fixups
* minor test fixes
* minor test fixes
* commands: plots/params: fix ui imports
* working on error handlng decorator, stopped at show checkpoints
* error_handler, further dvelopment
* plots just before moving loading to collect
* appending errors to results: initial passing
* fixup
* onerror: remove onerror fixture
* fixups
* plots/metrics/params/experiments: temporarily remove error warnings
* plots: extract parsing out of class method
* metrics/experiments: provide exception serializer for show-json
* params/plots/metrics: signal errors
* rebase fixups
* fix TODOs
* fixup
* skshetry's review refactor
astroid==2.5.7 has improved inference and was throwing
errors that were false negatives before. Fixing these
and ignoring some.
Also added `funcy.decorator` to the `signature-mutators`,
as it changes function signature (i.e. provides `Call` as
a first argument which is not required to pass).
Example errors that we were getting because of this:
```
tests/remotes/gdrive.py:40:11: E1120: No value for argument 'tries' in function call (no-value-for-parameter)
************* Module dvc.stage.serialize
dvc/stage/serialize.py:38:1: E1120: No value for argument 'func' in
function call (no-value-for-parameter)
************* Module dvc.fs.http
dvc/fs/http.py:19:1: E1120: No value for argument 'ctx' in function call (no-value-for-parameter)
************* Module dvc.fs.gdrive
dvc/fs/gdrive.py:66:11: E1120: No value for argument 'tries' in function call (no-value-for-parameter)
dvc/fs/gdrive.py:459:5: E1120: No value for argument 'ctx' in function call (no-value-for-parameter)
```
* params: read from ParamsDependency if possible
* params: introduce include_untracked flag
* params: include untracked upon targets
* experiments: add option to show tracked params
* fixing test
* params: rename tracked to deps
* params: roll back to default params.yaml behavior
* experiments: add option to show only used params on diff
* Update dvc/command/experiments.py
Co-authored-by: Jorge Orpinel <[email protected]>
* Update dvc/command/experiments.py
Co-authored-by: Jorge Orpinel <[email protected]>
* Update dvc/command/params.py
Co-authored-by: Jorge Orpinel <[email protected]>
Co-authored-by: Jorge Orpinel <[email protected]>
* exp show: add -n/--num to display the last N commits from HEAD
* exp run: fix empty commit with no changes
* add test for exp show with multiple commits
* allow -n greater than num commits in repo
* review fix
* experiments: move executor into a module
* experiments: separate executor into base/local
* rename LocalExecutor to TempDirExecutor, run in .dvc/tmp by default
* git: restore HEAD using reset not checkout in detached_head()
* experiments: support calling BaseExecutor.reproduce directly for
workspace runs
* experiments: run single experiments in local workspace by default
* update experiments tests for workspace changes
* experiments: update checkpoints for workspace runs
* update checkpoints tests
* update test_show
* add force param for apply
* exp apply: add --force option
* exp run/res: add --temp option to force tempdir execution for single
experiments
* force apply in non-apply specific tests
Currently, we iterate over targets manually in CLI, which results in a
complicated code and a DAG collection/check overhead. With this PR we
collect the DAG once, figure out all the needed targets within it and
just reproduce them in one pass.
* experiments: add utils.exp_commits for iterating over experiment commits
* repo: add support for all_experiments in brancher and used_cache
* git: make all_commits return commits in standard refs instead of --all
* gc: add --all-experiments to preserve cache for experiments
* update gc tests
* repo: support pushing and fetching specific revs internally
* exp push: push cache for experiment by default
* exp pull: pull cache for experiment by default
* fix empty git repo bug
* experiments: commit to refs/exps/... instead of branch heads
* update exp show
* restore checkpoint_resume kwarg
* refactor new() to use experiments stash
* experiments: use refspecs to populate and collect executors
* experiments: use new stash and merge on exp checkout
* experiments: fix executor chdir
* experiments: update run and show
* skip checkout after reproduce
* checkpoints: use experiments refspecs
* check if workspace was stashed before applying
* exp show: unify checkpoint/standalone experiment collection
* git: move iter_refs to backend
* update for scm changes
* experiments: replace exp checkout in favor of exp apply
* git: handle rev_parse errors in resolve_commit
* update refs containing and baseline check
* fix sigint handling for checkpoints
* update checkpoint exists behavior
* fix checkpoint baseline behavior
* update tests
* experiments: update gc
* update show tests
* fix type checking errors
* update diff
* scm: add diff, describe
* experiments: generate human readable names
* exp run/resume: allow user specified exp name with -n/--name
* update tests
* experiments: add `exp branch` for promoting experiment to full branch
* fix test
* fix missing file
* experiments: explicitly close scm instances before cleaning up tmp dir
* experiments: refactor regular/checkpoint experiment separation
* fix scm_checkout pull bug
* experiments: return stages from executor.reproduce
* since executor has to move to threadpool execution anyways, we no
longer have to work around the pickle repro result limitation
* refactor new/resume behavior
* refactor checkpoints tests
* use -f to force checkpoints reset/restart
* checkpoints: use 'exp run' and 'exp res[ume]' commands
* stage: all outs can be missing for checkpoint stages
* regular outputs may not be written at the time a checkpoint is
generated, but subsequent checkouts of that stage should not fail due
to the missing outs
* commit stage on checkpoint generation otherwise non-persist cached outs
are lost
* checkpoints: wait for stage proc to end after killing via terminate()
* stage: fix issues with killing checkpoint stage
* refactor signaling (use threading.Event instead of Condition)
* fix windows bug (kill all child processes via taskkill)
* experiments: refactor executor collection
* tests: move checkpoint tests into separate module
* refactor experiment tests to use stage fixture
* stage: make runs checkpointable
* api: add make_checkpoint API call
* tests: add test for checkpointed stage
* experiments: implement checkpoints callback chain
* initial working state
* use .dvc/tmp for checkpoint signal file location
* force repro for checkpoint experiments
* checkout: add flag to allow missing persistent outputs
(i.e. not yet created)
* use allow_persist_missing on checkpoint experiment repro
* executor: force checkout before checkpoints experiment repro
* move checkpoint commands to `dvc exp run`
* support resuming checkpoint runs with --continue
* fix git bugs
* experiments: include checkpoint commits in `exp show`
* use 1sec sleep timers
* fix apply_workspace test conflict
* tests: add test for `dvc exp run`
* cleanup signal file behavior
* fix bool conversion
* tests: add tests for checkpoint and checkpoint_continue
* fix styling
* fix checkpoint stage test
* fix checkpoint monitor thread condition/notification
* experiments: cleanup show UI
* show git tag/branch names instead of SHAs by default
* make timestamp formatting more like the viewer
* update tests
* place timestamps in their own column
* update command test
* exp: remove unused regex
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* experiments: add initial experiments.show
* only includes metrics + params (no code/data information)
* experiments: basic `dvc experiments show` functionality
* experiments: clone and run repro inside clone workspace
* repro: add -e/--experiment option
* experiments: hash experiments to identify duplicates
* experiments: update show
* experiments: checkout experiment after running repro
* experiments: add `dvc experiments checkout`
* experiments: add simple `dvc experiments diff` command
* just shows combined output from `metrics diff` and `plots diff` for
now
* add very simple tests
* add some useful output messages
* experiments: suppress help messages while feature is in development
* experiment related commands will be accessible but hidden from the
default command help messages
* add simple experiments command tests
* experiments: disable feature by default
* experiments only enabled in test environment (DVC_TEST) or when
core.experiments config option is true
* use fetch on checkout missing revs
karajan1001andPeter Rowlands
pre-commit-ci[bot]
Saugat Pachhai (सौगात)
dberenbaum
David de la Iglesia Castro
Paweł Redzyński
Ruslan Kuprieiev