dvc.yaml: add matrix-do (#9725)

* dvc.yaml: add matrix-do

* remove docs

* no do in matrix

* add types
This commit is contained in:
skshetry
2023-08-04 13:29:15 +05:45
committed by GitHub
parent bc86fa0643
commit d1160a28e0
5 changed files with 186 additions and 29 deletions
+125 -24
View File
@@ -2,6 +2,7 @@ import logging
import os
from collections.abc import Mapping, Sequence
from copy import deepcopy
from itertools import product
from typing import (
TYPE_CHECKING,
Any,
@@ -51,6 +52,7 @@ VARS_KWD = "vars"
WDIR_KWD = "wdir"
PARAMS_KWD = "params"
FOREACH_KWD = "foreach"
MATRIX_KWD = "matrix"
DO_KWD = "do"
DEFAULT_PARAMS_FILE = "params.yaml"
@@ -105,7 +107,7 @@ def is_map_or_seq(data: Any) -> bool:
return not isinstance(data, str) and _is_map_or_seq(data)
def split_foreach_name(name: str) -> Tuple[str, Optional[str]]:
def split_group_name(name: str) -> Tuple[str, Optional[str]]:
group, *keys = name.rsplit(JOIN, maxsplit=1)
return group, first(keys)
@@ -120,13 +122,15 @@ def check_interpolations(data: "DictStrAny", where: str, path: str):
return recurse(func)(data)
Definition = Union["ForeachDefinition", "EntryDefinition"]
Definition = Union["ForeachDefinition", "EntryDefinition", "MatrixDefinition"]
def make_definition(
resolver: "DataResolver", name: str, definition: "DictStrAny", **kwargs
) -> Definition:
args = resolver, resolver.context, name, definition
if MATRIX_KWD in definition:
return MatrixDefinition(*args, **kwargs)
if FOREACH_KWD in definition:
return ForeachDefinition(*args, **kwargs)
return EntryDefinition(*args, **kwargs)
@@ -159,7 +163,8 @@ class DataResolver:
self.tracked_vars: Dict[str, Mapping] = {}
stages_data = d.get(STAGES_KWD, {})
# we wrap the definitions into ForeachDefinition and EntryDefinition,
# we wrap the definitions into:
# ForeachDefinition, MatrixDefinition, and EntryDefinition
# that helps us to optimize, cache and selectively load each one of
# them as we need, and simplify all of this DSL/parsing logic.
self.definitions: Dict[str, Definition] = {
@@ -168,12 +173,13 @@ class DataResolver:
}
def resolve_one(self, name: str):
group, key = split_foreach_name(name)
group, key = split_group_name(name)
if not self._has_group_and_key(group, key):
raise EntryNotFound(f"Could not find '{name}'")
# all of the checks for `key` not being None for `ForeachDefinition`
# all of the checks for `key` not being None for
# `ForeachDefinition`/`MatrixDefinition`
# and/or `group` not existing in the `interim`, etc. should be
# handled by the `self.has_key()` above.
definition = self.definitions[group]
@@ -190,7 +196,7 @@ class DataResolver:
return {STAGES_KWD: data}
def has_key(self, key: str):
return self._has_group_and_key(*split_foreach_name(key))
return self._has_group_and_key(*split_group_name(key))
def _has_group_and_key(self, group: str, key: Optional[str] = None):
try:
@@ -198,16 +204,14 @@ class DataResolver:
except KeyError:
return False
if key:
return isinstance(definition, ForeachDefinition) and definition.has_member(
key
)
return not isinstance(definition, ForeachDefinition)
if not isinstance(definition, (ForeachDefinition, MatrixDefinition)):
return key is None
return key is not None and definition.has_member(key)
@collecting
def get_keys(self):
for name, definition in self.definitions.items():
if isinstance(definition, ForeachDefinition):
if isinstance(definition, (ForeachDefinition, MatrixDefinition)):
yield from definition.get_generated_names()
continue
yield name
@@ -256,8 +260,9 @@ class EntryDefinition:
name = self.name
if not skip_checks:
# we can check for syntax errors as we go for interpolated entries,
# but for foreach-generated ones, once is enough, which it does
# that itself. See `ForeachDefinition.do_definition`.
# but for foreach and matrix generated ones, once is enough, which it does
# that itself. See `ForeachDefinition.template`
# and `MatrixDefinition.template`.
check_syntax_errors(self.definition, name, self.relpath)
# we need to pop vars from generated/evaluated data
@@ -331,17 +336,18 @@ class ForeachDefinition:
self.name = name
assert DO_KWD in definition
assert MATRIX_KWD not in definition
self.foreach_data = definition[FOREACH_KWD]
self._do_definition = definition[DO_KWD]
self._template = definition[DO_KWD]
self.pair = IterationPair()
self.where = where
@cached_property
def do_definition(self):
def template(self):
# optimization: check for syntax errors only once for `foreach` stages
check_syntax_errors(self._do_definition, self.name, self.relpath)
return self._do_definition
check_syntax_errors(self._template, self.name, self.relpath)
return self._template
@cached_property
def resolved_iterable(self):
@@ -444,16 +450,111 @@ class ForeachDefinition:
# i.e. quadratic complexity).
generated = self._generate_name(key)
entry = EntryDefinition(
self.resolver, self.context, generated, self.do_definition
self.resolver, self.context, generated, self.template
)
try:
# optimization: skip checking for syntax errors on each foreach
# generated stages. We do it once when accessing do_definition.
# generated stages. We do it once when accessing template.
return entry.resolve_stage(skip_checks=True)
except ContextError as exc:
format_and_raise(exc, f"stage '{generated}'", self.relpath)
# let mypy know that this state is unreachable as format_and_raise
# does not return at all (it's not able to understand it for some
# reason)
raise AssertionError("unreachable")
class MatrixDefinition:
def __init__(
self,
resolver: DataResolver,
context: Context,
name: str,
definition: "DictStrAny",
where: str = STAGES_KWD,
):
self.resolver = resolver
self.relpath = self.resolver.relpath
self.context = context
self.name = name
assert MATRIX_KWD in definition
assert DO_KWD not in definition
assert FOREACH_KWD not in definition
self._template = definition.copy()
self.matrix_data = self._template.pop(MATRIX_KWD)
self.pair = IterationPair()
self.where = where
@cached_property
def template(self) -> "DictStrAny":
# optimization: check for syntax errors only once for `matrix` stages
check_syntax_errors(self._template, self.name, self.relpath)
return self._template
@cached_property
def resolved_iterable(self) -> Dict[str, List]:
return self._resolve_matrix_data()
def _resolve_matrix_data(self) -> Dict[str, List]:
try:
iterable = self.context.resolve(self.matrix_data, unwrap=False)
except (ContextError, ParseError) as exc:
format_and_raise(exc, f"'{self.where}.{self.name}.matrix'", self.relpath)
return iterable
@cached_property
def normalized_iterable(self) -> Dict[str, "DictStrAny"]:
"""Convert sequence to Mapping with keys normalized."""
iterable = self.resolved_iterable
assert isinstance(iterable, Mapping)
ret: Dict[str, "DictStrAny"] = {}
matrix = {key: enumerate(v) for key, v in iterable.items()}
for combination in product(*matrix.values()):
d: "DictStrAny" = {}
fragments: List[str] = []
for k, (i, v) in zip(matrix.keys(), combination):
d[k] = v
fragments.append(f"{k}{i}" if is_map_or_seq(v) else to_str(v))
key = "-".join(fragments)
ret[key] = d
return ret
def has_member(self, key: str) -> bool:
return key in self.normalized_iterable
def get_generated_names(self) -> List[str]:
return list(map(self._generate_name, self.normalized_iterable))
def _generate_name(self, key: str) -> str:
return f"{self.name}{JOIN}{key}"
def resolve_all(self) -> "DictStrAny":
return join(map(self.resolve_one, self.normalized_iterable))
def resolve_one(self, key: str) -> "DictStrAny":
return self._each_iter(key)
def _each_iter(self, key: str) -> "DictStrAny":
err_message = f"Could not find '{key}' in matrix group '{self.name}'"
with reraise(KeyError, EntryNotFound(err_message)):
value = self.normalized_iterable[key]
temp_dict = {self.pair.value: value}
with self.context.set_temporarily(temp_dict, reserve=True):
# optimization: item and key can be removed on __exit__() as they
# are top-level values, and are not merged recursively.
# This helps us avoid cloning context, which is slower
# (increasing the size of the context might increase
# the no. of items to be generated which means more cloning,
# i.e. quadratic complexity).
generated = self._generate_name(key)
entry = EntryDefinition(
self.resolver, self.context, generated, self.template
)
try:
# optimization: skip checking for syntax errors on each matrix
# generated stages. We do it once when accessing template.
return entry.resolve_stage(skip_checks=True)
except ContextError as exc:
format_and_raise(exc, f"stage '{generated}'", self.relpath)
+1 -1
View File
@@ -243,7 +243,7 @@ class StageLoad:
) -> Iterable[str]:
if not name:
return stages.keys()
if accept_group and stages.is_foreach_generated(name):
if accept_group and stages.is_foreach_or_matrix_generated(name):
return self._get_group_keys(stages, name)
if glob:
return fnmatch.filter(stages.keys(), name)
+2 -1
View File
@@ -11,7 +11,7 @@ from dvc.output import (
META_SCHEMA,
Output,
)
from dvc.parsing import DO_KWD, FOREACH_KWD, VARS_KWD
from dvc.parsing import DO_KWD, FOREACH_KWD, MATRIX_KWD, VARS_KWD
from dvc.stage.params import StageParams
STAGES = "stages"
@@ -77,6 +77,7 @@ PARAM_PSTAGE_NON_DEFAULT_SCHEMA = {str: [str]}
VARS_SCHEMA = [str, dict]
STAGE_DEFINITION = {
MATRIX_KWD: {str: Any(str, list)},
Required(StageParams.PARAM_CMD): Any(str, list),
Optional(StageParams.PARAM_WDIR): str,
Optional(StageParams.PARAM_DEPS): [str],
+6 -3
View File
@@ -7,7 +7,7 @@ from typing import TYPE_CHECKING, Any, Dict, Iterable, Optional, Tuple
from funcy import get_in, lcat, once, project
from dvc import dependency, output
from dvc.parsing import FOREACH_KWD, JOIN, EntryNotFound
from dvc.parsing import FOREACH_KWD, JOIN, MATRIX_KWD, EntryNotFound
from dvc.utils.objects import cached_property
from dvc_data.hashfile.meta import Meta
@@ -167,8 +167,11 @@ class StageLoader(Mapping):
def __contains__(self, name):
return self.resolver.has_key(name) # noqa: W601
def is_foreach_generated(self, name: str):
return name in self.stages_data and FOREACH_KWD in self.stages_data[name]
def is_foreach_or_matrix_generated(self, name: str) -> bool:
return (
name in self.stages_data
and {FOREACH_KWD, MATRIX_KWD} & self.stages_data[name].keys()
)
class SingleStageLoader(Mapping):
+52
View File
@@ -0,0 +1,52 @@
import pytest
from dvc.parsing import DataResolver, MatrixDefinition
MATRIX_DATA = {
"os": ["win", "linux"],
"pyv": [3.7, 3.8],
"dict": [{"arg1": 1}, {"arg2": 2}],
"list": [["out1", "out11"], ["out2", "out22"]],
}
@pytest.mark.parametrize(
"matrix",
[
MATRIX_DATA,
{
"os": "${os}",
"pyv": "${pyv}",
"dict": "${dict}",
"list": "${list}",
},
],
)
def test_matrix_interpolated(tmp_dir, dvc, matrix):
(tmp_dir / "params.yaml").dump(MATRIX_DATA)
resolver = DataResolver(dvc, tmp_dir.fs_path, {})
data = {
"matrix": matrix,
"cmd": "echo ${item.os} ${item.pyv} ${item.dict}"
" -- ${item.list.0} ${item.list.1}",
}
definition = MatrixDefinition(resolver, resolver.context, "build", data)
assert definition.resolve_all() == {
"[email protected]": {"cmd": "echo win 3.7 --arg1 1 -- out1 out11"},
"[email protected]": {"cmd": "echo win 3.7 --arg1 1 -- out2 out22"},
"[email protected]": {"cmd": "echo win 3.7 --arg2 2 -- out1 out11"},
"[email protected]": {"cmd": "echo win 3.7 --arg2 2 -- out2 out22"},
"[email protected]": {"cmd": "echo win 3.8 --arg1 1 -- out1 out11"},
"[email protected]": {"cmd": "echo win 3.8 --arg1 1 -- out2 out22"},
"[email protected]": {"cmd": "echo win 3.8 --arg2 2 -- out1 out11"},
"[email protected]": {"cmd": "echo win 3.8 --arg2 2 -- out2 out22"},
"[email protected]": {"cmd": "echo linux 3.7 --arg1 1 -- out1 out11"},
"[email protected]": {"cmd": "echo linux 3.7 --arg1 1 -- out2 out22"},
"[email protected]": {"cmd": "echo linux 3.7 --arg2 2 -- out1 out11"},
"[email protected]": {"cmd": "echo linux 3.7 --arg2 2 -- out2 out22"},
"[email protected]": {"cmd": "echo linux 3.8 --arg1 1 -- out1 out11"},
"[email protected]": {"cmd": "echo linux 3.8 --arg1 1 -- out2 out22"},
"[email protected]": {"cmd": "echo linux 3.8 --arg2 2 -- out1 out11"},
"[email protected]": {"cmd": "echo linux 3.8 --arg2 2 -- out2 out22"},
}