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https://github.com/Stone-Red-Code/dvc.git
synced 2026-11-02 07:18:25 +01:00
utils: extend to_chunks functionality, can specify number of chunks or length of chunk
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+1
-1
@@ -636,7 +636,7 @@ class RemoteBASE(object):
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if self.no_traverse and hasattr(self, "batch_exists"):
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with ThreadPoolExecutor(max_workers=self.JOBS) as executor:
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path_infos = [self.checksum_to_path_info(x) for x in checksums]
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chunks = to_chunks(path_infos, self.JOBS)
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chunks = to_chunks(path_infos, num_chunks=self.JOBS)
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results = executor.map(exists_with_progress, chunks)
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in_remote = itertools.chain.from_iterable(results)
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ret = list(itertools.compress(checksums, in_remote))
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@@ -360,9 +360,9 @@ class RemoteLOCAL(RemoteBASE):
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from_infos = cache
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return (
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to_chunks(from_infos, jobs),
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to_chunks(to_infos, jobs),
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to_chunks(names, jobs),
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to_chunks(from_infos, num_chunks=jobs),
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to_chunks(to_infos, num_chunks=jobs),
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to_chunks(names, num_chunks=jobs),
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)
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def _process(
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@@ -157,7 +157,7 @@ class RemoteSSH(RemoteBASE):
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with ThreadPoolExecutor(max_workers=max_workers) as executor:
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paths = [path_info.path for path_info in path_infos]
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chunks = to_chunks(paths, max_workers)
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chunks = to_chunks(paths, num_chunks=max_workers)
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chunks_and_channels = zip(chunks, channels)
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outcome = executor.map(_exists, chunks_and_channels)
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results = list(itertools.chain.from_iterable(outcome))
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+4
-2
@@ -7,7 +7,7 @@ import sqlite3
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import logging
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from dvc.config import Config
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from dvc.utils import remove, current_timestamp, relpath, chunk
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from dvc.utils import remove, current_timestamp, relpath, to_chunks
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from dvc.exceptions import DvcException
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from dvc.utils.fs import get_mtime_and_size, get_inode
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from dvc.utils.compat import fspath_py35
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@@ -450,7 +450,9 @@ class State(StateBase): # pylint: disable=too-many-instance-attributes
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remove(path)
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unused.append(relpath)
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for chunk_unused in chunk(unused, SQLITE_MAX_VARIABLES_NUMBER):
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for chunk_unused in to_chunks(
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unused, chunk_size=SQLITE_MAX_VARIABLES_NUMBER
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):
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cmd = "DELETE FROM {} WHERE path IN ({})".format(
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self.LINK_STATE_TABLE, ",".join(["?"] * len(chunk_unused))
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)
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+24
-12
@@ -183,16 +183,33 @@ def remove(path):
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raise
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def to_chunks(l, jobs):
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n = int(math.ceil(len(l) / jobs))
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def _split(list_to_split, chunk_size):
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return [
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list_to_split[i : i + chunk_size]
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for i in range(0, len(list_to_split), chunk_size)
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]
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if len(l) == 1:
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return [l]
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if n == 0:
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n = 1
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def _to_chunks_by_chunks_number(list_to_split, num_chunks):
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chunk_size = int(math.ceil(float(len(list_to_split)) / num_chunks))
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return [l[x : x + n] for x in range(0, len(l), n)]
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if len(list_to_split) == 1:
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return [list_to_split]
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if chunk_size == 0:
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chunk_size = 1
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return _split(list_to_split, chunk_size)
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def to_chunks(list_to_split, num_chunks=None, chunk_size=None):
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if (num_chunks and chunk_size) or (not num_chunks and not chunk_size):
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raise ValueError(
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"One and only one of 'num_chunks', 'chunk_size' must be defined"
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)
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if chunk_size:
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return _split(list_to_split, chunk_size)
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return _to_chunks_by_chunks_number(list_to_split, num_chunks)
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# NOTE: Check if we are in a bundle
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@@ -382,8 +399,3 @@ def relpath(path, start=os.curdir):
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):
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return path
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return os.path.relpath(path, start)
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def chunk(iterable, chunk_size):
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for i in range(0, len(iterable), chunk_size):
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yield iterable[i : i + chunk_size]
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@@ -1,16 +1,30 @@
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import pytest
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from dvc.utils import chunk
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from dvc.utils import to_chunks
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@pytest.mark.parametrize(
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"list_to_chunk, chunk_size, expected_chunks",
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[
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([1, 2, 3, 4], 1, [[1], [2], [3], [4]]),
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([1, 2, 3, 4], 2, [[1, 2], [3, 4]]),
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([1, 2, 3, 4], 3, [[1, 2, 3], [4]]),
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],
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"chunk_size, expected_chunks",
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[(1, [[1], [2], [3], [4]]), (2, [[1, 2], [3, 4]]), (3, [[1, 2, 3], [4]])],
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)
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def test_chunk(list_to_chunk, chunk_size, expected_chunks):
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result = list(chunk(list_to_chunk, chunk_size))
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def test_to_chunks_chunk_size(chunk_size, expected_chunks):
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list_to_chunk = [1, 2, 3, 4]
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result = list(to_chunks(list_to_chunk, chunk_size=chunk_size))
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assert result == expected_chunks
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@pytest.mark.parametrize("num_chunks, chunk_size", [(1, 2), (None, None)])
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def test_to_chunks_should_raise(num_chunks, chunk_size):
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list_to_chunk = [1, 2, 3]
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with pytest.raises(ValueError):
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to_chunks(list_to_chunk, num_chunks, chunk_size)
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@pytest.mark.parametrize(
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"num_chunks, expected_chunks",
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[(4, [[1], [2], [3], [4]]), (3, [[1, 2], [3, 4]]), (2, [[1, 2], [3, 4]])],
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)
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def test_to_chunks_num_chunks(num_chunks, expected_chunks):
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list_to_chunk = [1, 2, 3, 4]
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result = to_chunks(list_to_chunk, num_chunks=num_chunks)
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assert result == expected_chunks
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