odb: use regular upload() when the source filesystem is local (#6365)

* odb: use regular upload() when the source filesystem is local

* support download_file too
This commit is contained in:
Batuhan Taskaya
2021-07-27 15:55:49 +03:00
committed by GitHub
parent 1e43c303a7
commit 4a843dbd61
6 changed files with 52 additions and 42 deletions
+36 -27
View File
@@ -5,6 +5,7 @@ from concurrent.futures import ThreadPoolExecutor
from copy import copy
from typing import TYPE_CHECKING, Optional
from dvc.fs.local import LocalFileSystem
from dvc.objects.errors import ObjectDBPermissionError, ObjectFormatError
from dvc.objects.file import HashFile
from dvc.progress import Tqdm
@@ -75,6 +76,40 @@ class ObjectDB:
hash_info,
)
def _add_file(self, from_fs, from_info, to_info, move):
self.makedirs(to_info.parent)
use_move = isinstance(from_fs, type(self.fs)) and move
try:
if use_move:
self.fs.move(from_info, to_info)
elif isinstance(from_fs, LocalFileSystem):
if not isinstance(from_info, from_fs.PATH_CLS):
from_info = from_fs.PATH_CLS(from_info)
self.fs.upload(from_info, to_info)
elif isinstance(self.fs, LocalFileSystem):
from_fs.download_file(from_info, to_info)
else:
with from_fs.open(from_info, mode="rb") as fobj:
self.fs.upload_fobj(fobj, to_info)
except OSError as exc:
# If the target file already exists, we are going to simply
# ignore the exception (#4992).
#
# On Windows, it is not always guaranteed that you'll get
# FileExistsError (it might be PermissionError or a bare OSError)
# but all of those exceptions raised from the original
# FileExistsError so we have a separate check for that.
if isinstance(exc, FileExistsError) or (
os.name == "nt"
and exc.__context__
and isinstance(exc.__context__, FileExistsError)
):
logger.debug("'%s' file already exists, skipping", to_info)
if use_move:
from_fs.remove(from_info)
else:
raise
def add(
self,
path_info: "AnyPath",
@@ -97,33 +132,7 @@ class ObjectDB:
cache_info = self.hash_to_path_info(hash_info.value)
# using our makedirs to create dirs with proper permissions
self.makedirs(cache_info.parent)
use_move = isinstance(fs, type(self.fs)) and move
try:
if use_move:
self.fs.move(path_info, cache_info)
else:
with fs.open(path_info, mode="rb") as fobj:
self.fs.upload_fobj(fobj, cache_info)
except OSError as exc:
# If the target file already exists, we are going to simply
# ignore the exception (#4992).
#
# On Windows, it is not always guaranteed that you'll get
# FileExistsError (it might be PermissionError or a bare OSError)
# but all of those exceptions raised from the original
# FileExistsError so we have a separate check for that.
if isinstance(exc, FileExistsError) or (
os.name == "nt"
and exc.__context__
and isinstance(exc.__context__, FileExistsError)
):
logger.debug("'%s' file already exists, skipping", path_info)
if use_move:
fs.remove(path_info)
else:
raise
self._add_file(fs, path_info, cache_info, move)
try:
if verify:
self.check(hash_info, check_hash=True)
+2 -4
View File
@@ -63,9 +63,7 @@ def test_clear_on_download_err(tmp_dir, dvc, index, mocker):
assert list(index.hashes())
mocker.patch(
"dvc.fs.local.LocalFileSystem.upload_fobj", side_effect=Exception
)
mocker.patch("dvc.fs.local.LocalFileSystem.upload", side_effect=Exception)
with pytest.raises(DownloadError):
dvc.pull()
assert not list(index.hashes())
@@ -82,7 +80,7 @@ def test_partial_upload(tmp_dir, dvc, index, mocker):
raise Exception("stop baz")
return original(self, from_file, to_info, name, **kwargs)
mocker.patch.object(LocalFileSystem, "upload_fobj", unreliable_upload)
mocker.patch.object(LocalFileSystem, "upload", unreliable_upload)
with pytest.raises(UploadError):
dvc.push()
assert not list(index.hashes())
+1 -1
View File
@@ -51,7 +51,7 @@ def test_cache_reused(erepo_dir, mocker, local_cloud):
erepo_dir.dvc_gen("file", "text", commit="add file")
erepo_dir.dvc.push()
download_spy = mocker.spy(LocalFileSystem, "upload_fobj")
download_spy = mocker.spy(LocalFileSystem, "upload")
# Use URL to prevent any fishy optimizations
url = f"file://{erepo_dir}"
+1 -1
View File
@@ -306,7 +306,7 @@ def test_download_error_pulling_imported_stage(tmp_dir, dvc, erepo_dir):
remove(dst_cache)
with patch(
"dvc.fs.local.LocalFileSystem.upload_fobj", side_effect=Exception
"dvc.fs.local.LocalFileSystem.upload", side_effect=Exception
), pytest.raises(DownloadError):
dvc.pull(["foo_imported.dvc"])
+5 -5
View File
@@ -179,7 +179,7 @@ def test_partial_push_n_pull(tmp_dir, dvc, tmp_path_factory, local_remote):
baz = tmp_dir.dvc_gen({"baz": {"foo": "foo content"}})[0].outs[0]
# Faulty upload version, failing on foo
original = LocalFileSystem.upload_fobj
original = LocalFileSystem.upload
odb = dvc.cloud.get_remote_odb("upstream")
def unreliable_upload(self, fobj, to_info, **kwargs):
@@ -189,7 +189,7 @@ def test_partial_push_n_pull(tmp_dir, dvc, tmp_path_factory, local_remote):
raise Exception("stop foo")
return original(self, fobj, to_info, **kwargs)
with patch.object(LocalFileSystem, "upload_fobj", unreliable_upload):
with patch.object(LocalFileSystem, "upload", unreliable_upload):
with pytest.raises(UploadError) as upload_error_info:
dvc.push()
assert upload_error_info.value.amount == 2
@@ -203,7 +203,7 @@ def test_partial_push_n_pull(tmp_dir, dvc, tmp_path_factory, local_remote):
remove(dvc.odb.local.cache_dir)
baz.collect_used_dir_cache()
with patch.object(LocalFileSystem, "upload_fobj", side_effect=Exception):
with patch.object(LocalFileSystem, "upload", side_effect=Exception):
with pytest.raises(DownloadError) as download_error_info:
dvc.pull()
# error count should be len(.dir + standalone file checksums)
@@ -218,7 +218,7 @@ def test_raise_on_too_many_open_files(
mocker.patch.object(
LocalFileSystem,
"upload_fobj",
"upload",
side_effect=OSError(errno.EMFILE, "Too many open files"),
)
@@ -269,7 +269,7 @@ def test_push_order(tmp_dir, dvc, tmp_path_factory, mocker, local_remote):
tmp_dir.dvc_gen({"baz": "baz content"})
mocked_upload = mocker.patch.object(
LocalFileSystem, "upload_fobj", return_value=0
LocalFileSystem, "upload", return_value=0
)
dvc.push()
+7 -4
View File
@@ -349,7 +349,6 @@ def test_update_import_url_to_remote(tmp_dir, dvc, workspace, local_remote):
@pytest.mark.parametrize(
"workspace",
[
pytest.lazy_fixture("local_cloud"),
pytest.lazy_fixture("s3"),
pytest.param(
pytest.lazy_fixture("gs"), marks=pytest.mark.needs_internet
@@ -378,11 +377,15 @@ def test_update_import_url_to_remote_directory(
}
)
upload_file_mock = mocker.spy(type(dvc.odb.local.fs), "upload_fobj")
download_file_mock = mocker.spy(
type(dvc.cloud.get_remote_odb("cache").fs), "download_file"
)
stage = dvc.update(stage.path, to_remote=True)
# 2 new hashes (foo2, baz2) + 1 .dir hash
assert upload_file_mock.mock.call_count == 3
# 2 new hashes (foo2, baz2)
assert download_file_mock.mock.call_count == 2
# The new .dir hash will be transferred through MemFs, so
# we will not account the download_file() for it.
dvc.pull("data")
assert (tmp_dir / "data").read_text() == {