mirror of
https://github.com/Stone-Red-Code/dvc.git
synced 2026-11-02 07:18:25 +01:00
Tomás Farías SantanaandRuslan Kuprieiev
ca2e6a004c
* Add support for WebHDFS * Style and linting fixes * Implement abstract methods and disable no-member pylint errors * Add init unit test * Yield client and fix redefinition of hdfs * Get dynamic hdfs Docker port * Add support for open in WebHDFSTree * Remove hdfscli_config fallbacks in WebHDFSTree * Use port 50070 for webhdfs * WebHDFSTree supports http URL and proper walking * Fix failing unit test after refactoring * Add overwrite argument to upload * Add remaining func tests for webhdfs * Remove print statements * Allow dynamic attributes in pylint for hdfs library * Comment error on instantiating HDFS client from config * Remove depth argument from call to walk * Update dvc/tree/webhdfs.py * Remove unnecessary deque * Check exception messages hdfs client failure from config * Return client directly Co-authored-by: Ruslan Kuprieiev <[email protected]> * Split long line * Add size to HashInfo * Implement move via hdfs.rename * Add missing line * Make parent directories before moving file in WebHDFS * Add total to progress bar Co-authored-by: Ruslan Kuprieiev <[email protected]>
393 lines
12 KiB
Python
393 lines
12 KiB
Python
import logging
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import os
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import shutil
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import configobj
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import pytest
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from git import Repo
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from dvc.cache.local import LocalCache
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from dvc.exceptions import CollectCacheError
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from dvc.main import main
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from dvc.repo import Repo as DvcRepo
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from dvc.tree.local import LocalTree
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from dvc.utils.fs import remove
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from tests.basic_env import TestDir, TestDvcGit
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class TestGC(TestDvcGit):
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def setUp(self):
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super().setUp()
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self.dvc.add(self.FOO)
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self.dvc.add(self.DATA_DIR)
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self.good_cache = [
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self.dvc.cache.local.tree.hash_to_path_info(md5)
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for md5 in self.dvc.cache.local.all()
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]
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self.bad_cache = []
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for i in ["123", "234", "345"]:
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path = os.path.join(self.dvc.cache.local.cache_dir, i[0:2], i[2:])
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self.create(path, i)
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self.bad_cache.append(path)
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def test_api(self):
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self.dvc.gc(workspace=True)
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self._test_gc()
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def test_cli(self):
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ret = main(["gc", "-wf"])
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self.assertEqual(ret, 0)
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self._test_gc()
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def _test_gc(self):
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self.assertTrue(os.path.isdir(self.dvc.cache.local.cache_dir))
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for c in self.bad_cache:
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self.assertFalse(os.path.exists(c))
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for c in self.good_cache:
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self.assertTrue(os.path.exists(c))
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class TestGCBranchesTags(TestDvcGit):
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def _check_cache(self, num):
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total = 0
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for _, _, files in os.walk(os.path.join(".dvc", "cache")):
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total += len(files)
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self.assertEqual(total, num)
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def test(self):
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fname = "file"
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with open(fname, "w+") as fobj:
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fobj.write("v1.0")
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stages = self.dvc.add(fname)
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self.assertEqual(len(stages), 1)
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self.dvc.scm.add([".gitignore", stages[0].relpath])
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self.dvc.scm.commit("v1.0")
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self.dvc.scm.tag("v1.0")
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self.dvc.scm.checkout("test", create_new=True)
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self.dvc.remove(stages[0].relpath)
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with open(fname, "w+") as fobj:
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fobj.write("test")
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stages = self.dvc.add(fname)
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self.assertEqual(len(stages), 1)
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self.dvc.scm.add([".gitignore", stages[0].relpath])
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self.dvc.scm.commit("test")
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self.dvc.scm.checkout("master")
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self.dvc.remove(stages[0].relpath)
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with open(fname, "w+") as fobj:
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fobj.write("trash")
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stages = self.dvc.add(fname)
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self.assertEqual(len(stages), 1)
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self.dvc.scm.add([".gitignore", stages[0].relpath])
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self.dvc.scm.commit("trash")
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self.dvc.remove(stages[0].relpath)
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with open(fname, "w+") as fobj:
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fobj.write("master")
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stages = self.dvc.add(fname)
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self.assertEqual(len(stages), 1)
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self.dvc.scm.add([".gitignore", stages[0].relpath])
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self.dvc.scm.commit("master")
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self._check_cache(4)
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self.dvc.gc(all_tags=True, all_branches=True)
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self._check_cache(3)
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self.dvc.gc(all_tags=False, all_branches=True)
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self._check_cache(2)
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self.dvc.gc(all_tags=True, all_branches=False)
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self._check_cache(1)
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class TestGCMultipleDvcRepos(TestDvcGit):
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def _check_cache(self, num):
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total = 0
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for _, _, files in os.walk(os.path.join(".dvc", "cache")):
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total += len(files)
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self.assertEqual(total, num)
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def setUp(self):
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super().setUp()
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self.additional_path = TestDir.mkdtemp()
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self.additional_git = Repo.init(self.additional_path)
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self.additional_dvc = DvcRepo.init(self.additional_path)
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cache_path = os.path.join(self._root_dir, ".dvc", "cache")
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config_path = os.path.join(
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self.additional_path, ".dvc", "config.local"
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)
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cfg = configobj.ConfigObj()
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cfg.filename = config_path
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cfg["cache"] = {"dir": cache_path}
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cfg.write()
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self.additional_dvc = DvcRepo(self.additional_path)
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def test(self):
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# ADD FILE ONLY IN MAIN PROJECT
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fname = "only_in_first"
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with open(fname, "w+") as fobj:
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fobj.write("only in main repo")
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stages = self.dvc.add(fname)
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self.assertEqual(len(stages), 1)
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# ADD FILE IN MAIN PROJECT THAT IS ALSO IN SECOND PROJECT
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fname = "in_both"
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with open(fname, "w+") as fobj:
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fobj.write("in both repos")
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stages = self.dvc.add(fname)
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self.assertEqual(len(stages), 1)
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cwd = os.getcwd()
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os.chdir(self.additional_path)
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# ADD FILE ONLY IN SECOND PROJECT
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fname = "only_in_second"
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with open(fname, "w+") as fobj:
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fobj.write("only in additional repo")
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stages = self.additional_dvc.add(fname)
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self.assertEqual(len(stages), 1)
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# ADD FILE IN SECOND PROJECT THAT IS ALSO IN MAIN PROJECT
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fname = "in_both"
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with open(fname, "w+") as fobj:
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fobj.write("in both repos")
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stages = self.additional_dvc.add(fname)
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self.assertEqual(len(stages), 1)
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os.chdir(cwd)
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self._check_cache(3)
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self.dvc.gc(repos=[self.additional_path], workspace=True)
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self._check_cache(3)
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self.dvc.gc(workspace=True)
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self._check_cache(2)
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def test_all_commits(tmp_dir, scm, dvc):
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tmp_dir.dvc_gen("testfile", "uncommitted")
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tmp_dir.dvc_gen("testfile", "committed", commit="committed")
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tmp_dir.dvc_gen("testfile", "modified", commit="modified")
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tmp_dir.dvc_gen("testfile", "workspace")
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n = _count_files(dvc.cache.local.cache_dir)
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dvc.gc(all_commits=True)
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# Only one uncommitted file should go away
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assert _count_files(dvc.cache.local.cache_dir) == n - 1
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def test_gc_no_dir_cache(tmp_dir, dvc):
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tmp_dir.dvc_gen({"foo": "foo", "bar": "bar"})
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(dir_stage,) = tmp_dir.dvc_gen({"dir": {"x": "x", "subdir": {"y": "y"}}})
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remove(dir_stage.outs[0].cache_path)
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with pytest.raises(CollectCacheError):
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dvc.gc(workspace=True)
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assert _count_files(dvc.cache.local.cache_dir) == 4
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dvc.gc(force=True, workspace=True)
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assert _count_files(dvc.cache.local.cache_dir) == 2
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def _count_files(path):
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return sum(len(files) for _, _, files in os.walk(path))
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def test_gc_no_unpacked_dir(tmp_dir, dvc):
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dir_stages = tmp_dir.dvc_gen({"dir": {"file": "text"}})
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dvc.status()
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os.remove("dir.dvc")
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unpackeddir = (
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dir_stages[0].outs[0].cache_path + LocalCache.UNPACKED_DIR_SUFFIX
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)
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# older (pre 1.0) versions of dvc used to generate this dir
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shutil.copytree("dir", unpackeddir)
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assert os.path.exists(unpackeddir)
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dvc.gc(force=True, workspace=True)
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assert not os.path.exists(unpackeddir)
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def test_gc_without_workspace_raises_error(tmp_dir, dvc):
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dvc.gc(force=True, workspace=True) # works without error
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from dvc.exceptions import InvalidArgumentError
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with pytest.raises(InvalidArgumentError):
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dvc.gc(force=True)
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with pytest.raises(InvalidArgumentError):
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dvc.gc(force=True, workspace=False)
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def test_gc_cloud_with_or_without_specifier(tmp_dir, erepo_dir, local_cloud):
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erepo_dir.add_remote(config=local_cloud.config)
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dvc = erepo_dir.dvc
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from dvc.exceptions import InvalidArgumentError
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with pytest.raises(InvalidArgumentError):
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dvc.gc(force=True, cloud=True)
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dvc.gc(cloud=True, all_tags=True)
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dvc.gc(cloud=True, all_commits=True)
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dvc.gc(cloud=True, all_branches=True)
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dvc.gc(cloud=True, all_commits=False, all_branches=True, all_tags=True)
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def test_gc_without_workspace_on_tags_branches_commits(tmp_dir, dvc):
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dvc.gc(force=True, all_tags=True)
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dvc.gc(force=True, all_commits=True)
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dvc.gc(force=False, all_branches=True)
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# even if workspace is disabled, and others are enabled, assume as if
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# workspace is enabled.
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dvc.gc(force=False, all_branches=True, all_commits=False, workspace=False)
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def test_gc_without_workspace(tmp_dir, dvc, caplog):
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with caplog.at_level(logging.WARNING, logger="dvc"):
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assert main(["gc", "-vf"]) == 255
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assert (
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"Either of `-w|--workspace`, `-a|--all-branches`, `-T|--all-tags` "
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"or `--all-commits` needs to be set."
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) in caplog.text
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def test_gc_cloud_without_any_specifier(tmp_dir, dvc, caplog):
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with caplog.at_level(logging.WARNING, logger="dvc"):
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assert main(["gc", "-cvf"]) == 255
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assert (
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"Either of `-w|--workspace`, `-a|--all-branches`, `-T|--all-tags` "
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"or `--all-commits` needs to be set."
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) in caplog.text
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def test_gc_with_possible_args_positive(tmp_dir, dvc):
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for flag in [
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"-w",
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"-a",
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"-T",
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"--all-commits",
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"-aT",
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"-wa",
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"-waT",
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]:
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assert main(["gc", "-vf", flag]) == 0
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def test_gc_cloud_positive(tmp_dir, dvc, tmp_path_factory, local_remote):
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for flag in ["-cw", "-ca", "-cT", "-caT", "-cwT"]:
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assert main(["gc", "-vf", flag]) == 0
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def test_gc_cloud_remove_order(tmp_dir, scm, dvc, tmp_path_factory, mocker):
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storage = os.fspath(tmp_path_factory.mktemp("test_remote_base"))
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dvc.config["remote"]["local_remote"] = {"url": storage}
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dvc.config["core"]["remote"] = "local_remote"
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(standalone, dir1, dir2) = tmp_dir.dvc_gen(
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{
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"file1": "standalone",
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"dir1": {"file2": "file2"},
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"dir2": {"file3": "file3", "file4": "file4"},
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}
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)
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dvc.push()
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dvc.remove(standalone.relpath)
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dvc.remove(dir1.relpath)
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dvc.remove(dir2.relpath)
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dvc.gc(workspace=True)
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mocked_remove = mocker.patch.object(LocalTree, "remove", autospec=True)
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dvc.gc(workspace=True, cloud=True)
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assert len(mocked_remove.mock_calls) == 8
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# dir (and unpacked dir) should be first 4 checksums removed from
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# the remote
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for args in mocked_remove.call_args_list[:4]:
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checksum = str(args[0][1])
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assert checksum.endswith(".dir") or checksum.endswith(".dir.unpacked")
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def test_gc_not_collect_pipeline_tracked_files(tmp_dir, dvc, run_copy):
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from dvc.dvcfile import PIPELINE_FILE, Dvcfile
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tmp_dir.gen("foo", "foo")
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tmp_dir.gen("bar", "bar")
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run_copy("foo", "foo2", name="copy")
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shutil.rmtree(dvc.stage_cache.cache_dir)
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assert _count_files(dvc.cache.local.cache_dir) == 1
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dvc.gc(workspace=True, force=True)
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assert _count_files(dvc.cache.local.cache_dir) == 1
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# remove pipeline file and lockfile and check
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Dvcfile(dvc, PIPELINE_FILE).remove(force=True)
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dvc.gc(workspace=True, force=True)
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assert _count_files(dvc.cache.local.cache_dir) == 0
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@pytest.mark.parametrize(
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"workspace",
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[
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pytest.lazy_fixture("local_cloud"),
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pytest.lazy_fixture("s3"),
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pytest.lazy_fixture("gs"),
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pytest.lazy_fixture("hdfs"),
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pytest.lazy_fixture("webhdfs"),
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pytest.param(
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pytest.lazy_fixture("ssh"),
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marks=pytest.mark.skipif(
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os.name == "nt", reason="disabled on windows"
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),
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),
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],
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indirect=True,
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)
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def test_gc_external_output(tmp_dir, dvc, workspace):
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workspace.gen({"foo": "foo", "bar": "bar"})
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(foo_stage,) = dvc.add("remote://workspace/foo")
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(bar_stage,) = dvc.add("remote://workspace/bar")
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foo_hash = foo_stage.outs[0].hash_info.value
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bar_hash = bar_stage.outs[0].hash_info.value
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assert (
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workspace / "cache" / foo_hash[:2] / foo_hash[2:]
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).read_text() == "foo"
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assert (
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workspace / "cache" / bar_hash[:2] / bar_hash[2:]
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).read_text() == "bar"
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(tmp_dir / "foo.dvc").unlink()
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dvc.gc(workspace=True)
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assert not (workspace / "cache" / foo_hash[:2] / foo_hash[2:]).exists()
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assert (
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workspace / "cache" / bar_hash[:2] / bar_hash[2:]
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).read_text() == "bar"
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