Files
dvc/dvc/fs/base.py
T
Ruslan Kuprieiev aa255a1102 output: optimize obj collection (#6277)
* output: str only once

Calling `__str__` takes a long time and if we are dealing with a large
dataset, it will result in a very substantial time. For example,
locally, for 700K objects, it took 20sec more.

Related to #6276

* output: don't use os.path.join

Takes around 2sec for 700K objects.

* output: use fs.sep

* output: remove unused sep
2021-07-03 21:53:55 +03:00

344 lines
11 KiB
Python

import logging
from concurrent.futures import ThreadPoolExecutor, as_completed
from functools import partial, partialmethod
from multiprocessing import cpu_count
from typing import Any, ClassVar, Dict, FrozenSet, Optional
from dvc.exceptions import DvcException
from dvc.path_info import URLInfo
from dvc.progress import Tqdm
from dvc.utils import tmp_fname
from dvc.utils.fs import makedirs, move
from dvc.utils.http import open_url
logger = logging.getLogger(__name__)
class RemoteCmdError(DvcException):
def __init__(self, remote, cmd, ret, err):
super().__init__(
"{remote} command '{cmd}' finished with non-zero return code"
" {ret}': {err}".format(remote=remote, cmd=cmd, ret=ret, err=err)
)
class RemoteActionNotImplemented(DvcException):
def __init__(self, action, scheme):
m = f"{action} is not supported for {scheme} remotes"
super().__init__(m)
class RemoteMissingDepsError(DvcException):
pass
class BaseFileSystem:
sep = "/"
scheme = "base"
REQUIRES: ClassVar[Dict[str, str]] = {}
PATH_CLS = URLInfo # type: Any
_JOBS = 4 * cpu_count()
CHECKSUM_DIR_SUFFIX = ".dir"
HASH_JOBS = max(1, min(4, cpu_count() // 2))
LIST_OBJECT_PAGE_SIZE = 1000
TRAVERSE_WEIGHT_MULTIPLIER = 5
TRAVERSE_PREFIX_LEN = 3
TRAVERSE_THRESHOLD_SIZE = 500000
CAN_TRAVERSE = True
# Needed for some providers, and http open()
CHUNK_SIZE = 64 * 1024 * 1024 # 64 MiB
PARAM_CHECKSUM: ClassVar[Optional[str]] = None
DETAIL_FIELDS: FrozenSet[str] = frozenset()
def __init__(self, **kwargs):
self._check_requires(**kwargs)
self.jobs = kwargs.get("jobs") or self._JOBS
self.hash_jobs = kwargs.get("checksum_jobs") or self.HASH_JOBS
@classmethod
def _strip_protocol(cls, path: str):
return path
@staticmethod
def _get_kwargs_from_urls(urlpath): # pylint:disable=unused-argument
return {}
@classmethod
def get_missing_deps(cls):
import importlib
missing = []
for package, module in cls.REQUIRES.items():
try:
importlib.import_module(module)
except ImportError:
missing.append(package)
return missing
def _check_requires(self, **kwargs):
from ..scheme import Schemes
from ..utils import format_link
from ..utils.pkg import PKG
missing = self.get_missing_deps()
if not missing:
return
url = kwargs.get("url", f"{self.scheme}://")
scheme = self.scheme
if scheme == Schemes.WEBDAVS:
scheme = Schemes.WEBDAV
by_pkg = {
"pip": f"pip install 'dvc[{scheme}]'",
"conda": f"conda install -c conda-forge dvc-{scheme}",
}
cmd = by_pkg.get(PKG)
if cmd:
link = format_link("https://dvc.org/doc/install")
hint = (
f"To install dvc with those dependencies, run:\n"
"\n"
f"\t{cmd}\n"
"\n"
f"See {link} for more info."
)
else:
link = format_link("https://github.com/iterative/dvc/issues")
hint = f"Please report this bug to {link}. Thank you!"
raise RemoteMissingDepsError(
f"URL '{url}' is supported but requires these missing "
f"dependencies: {missing}. {hint}"
)
def open(self, path_info, mode: str = "r", encoding: str = None, **kwargs):
if hasattr(self, "_generate_download_url"):
# pylint:disable=no-member
func = self._generate_download_url # type: ignore[attr-defined]
get_url = partial(func, path_info)
return open_url(get_url, mode=mode, encoding=encoding, **kwargs)
raise RemoteActionNotImplemented("open", self.scheme)
def exists(self, path_info) -> bool:
raise NotImplementedError
# pylint: disable=unused-argument
def isdir(self, path_info):
"""Optional: Overwrite only if the remote has a way to distinguish
between a directory and a file.
"""
return False
def isfile(self, path_info):
"""Optional: Overwrite only if the remote has a way to distinguish
between a directory and a file.
"""
return True
def isexec(self, path_info):
"""Optional: Overwrite only if the remote has a way to distinguish
between executable and non-executable file.
"""
return False
def iscopy(self, path_info):
"""Check if this file is an independent copy."""
return False # We can't be sure by default
def walk(self, top, topdown=True, onerror=None, **kwargs):
"""Return a generator with (root, dirs, files)."""
raise NotImplementedError
def walk_files(self, path_info, **kwargs):
"""Return a generator with `PathInfo`s to all the files.
Optional kwargs:
prefix (bool): If true `path_info` will be treated as a prefix
rather than directory path.
"""
raise NotImplementedError
def ls(self, path_info, detail=False):
raise RemoteActionNotImplemented("ls", self.scheme)
def find(self, path_info, detail=False, prefix=None):
raise RemoteActionNotImplemented("find", self.scheme)
def is_empty(self, path_info):
return False
def info(self, path_info):
raise NotImplementedError
def getsize(self, path_info):
return self.info(path_info).get("size")
def remove(self, path_info):
raise RemoteActionNotImplemented("remove", self.scheme)
def makedirs(self, path_info):
"""Optional: Implement only if the remote needs to create
directories before copying/linking/moving data
"""
def move(self, from_info, to_info):
self.copy(from_info, to_info)
self.remove(from_info)
def copy(self, from_info, to_info):
raise RemoteActionNotImplemented("copy", self.scheme)
def symlink(self, from_info, to_info):
raise RemoteActionNotImplemented("symlink", self.scheme)
def hardlink(self, from_info, to_info):
raise RemoteActionNotImplemented("hardlink", self.scheme)
def reflink(self, from_info, to_info):
raise RemoteActionNotImplemented("reflink", self.scheme)
# pylint: enable=unused-argument
@classmethod
def is_dir_hash(cls, hash_):
if not hash_:
return False
return hash_.endswith(cls.CHECKSUM_DIR_SUFFIX)
def upload(self, from_info, to_info, name=None, no_progress_bar=False):
if not hasattr(self, "_upload"):
raise RemoteActionNotImplemented("upload", self.scheme)
if to_info.scheme != self.scheme:
raise NotImplementedError
if from_info.scheme != "local":
raise NotImplementedError
logger.debug("Uploading '%s' to '%s'", from_info, to_info)
name = name or from_info.name
self._upload( # noqa, pylint: disable=no-member
from_info.fspath,
to_info,
name=name,
no_progress_bar=no_progress_bar,
)
def upload_fobj(
self, fobj, to_info, no_progress_bar=False, size=None, **pbar_args
):
if not hasattr(self, "_upload_fobj"):
raise RemoteActionNotImplemented("upload_fobj", self.scheme)
with Tqdm.wrapattr(
fobj,
"read",
disable=no_progress_bar,
bytes=True,
total=size,
**pbar_args,
) as wrapped:
self._upload_fobj( # pylint: disable=no-member
wrapped, to_info, size=size
)
def download(
self,
from_info,
to_info,
name=None,
no_progress_bar=False,
jobs=None,
_only_file=False,
**kwargs,
):
if not hasattr(self, "_download"):
raise RemoteActionNotImplemented("download", self.scheme)
if from_info.scheme != self.scheme:
raise NotImplementedError
if to_info.scheme == self.scheme != "local":
self.copy(from_info, to_info)
return 0
if to_info.scheme != "local":
raise NotImplementedError
if not _only_file and self.isdir(from_info):
return self._download_dir(
from_info, to_info, name, no_progress_bar, jobs, **kwargs
)
return self._download_file(from_info, to_info, name, no_progress_bar)
download_file = partialmethod(download, _only_file=True)
def _download_dir(
self, from_info, to_info, name, no_progress_bar, jobs, **kwargs
):
from_infos = list(self.walk_files(from_info, **kwargs))
if not from_infos:
makedirs(to_info, exist_ok=True)
return None
to_infos = (
to_info / info.relative_to(from_info) for info in from_infos
)
with Tqdm(
total=len(from_infos),
desc="Downloading directory",
unit="Files",
disable=no_progress_bar,
) as pbar:
download_files = pbar.wrap_fn(
partial(self._download_file, name=name, no_progress_bar=True)
)
max_workers = jobs or self.jobs
with ThreadPoolExecutor(max_workers=max_workers) as executor:
futures = [
executor.submit(download_files, from_info, to_info)
for from_info, to_info in zip(from_infos, to_infos)
]
# NOTE: unlike pulling/fetching cache, where we need to
# download everything we can, not raising an error here might
# turn very ugly, as the user might think that he has
# downloaded a complete directory, while having a partial one,
# which might cause unexpected results in his pipeline.
for future in as_completed(futures):
# NOTE: executor won't let us raise until all futures that
# it has are finished, so we need to cancel them ourselves
# before re-raising.
exc = future.exception()
if exc:
for entry in futures:
entry.cancel()
raise exc
def _download_file(self, from_info, to_info, name, no_progress_bar):
makedirs(to_info.parent, exist_ok=True)
logger.debug("Downloading '%s' to '%s'", from_info, to_info)
name = name or to_info.name
tmp_file = tmp_fname(to_info)
self._download( # noqa, pylint: disable=no-member
from_info, tmp_file, name=name, no_progress_bar=no_progress_bar
)
move(tmp_file, to_info)