Files
dvc/tests/func/test_repo_index.py
T
Saugat Pachhai 6c33fbb617 introduce index (#6300)
* introduce index

* migrate tests to use index

* migrate checkout/diff to use index.outs

* test for index

* fix typings

* add few more tests
2021-08-05 14:23:40 +03:00

248 lines
7.3 KiB
Python

import os
from itertools import chain
import pytest
from pygtrie import Trie
from dvc.repo.index import Index
from dvc.stage import PipelineStage, Stage
from dvc.utils import relpath
from tests.func.plots.utils import _write_json
def test_index(tmp_dir, scm, dvc, run_copy):
(stage1,) = tmp_dir.dvc_gen("foo", "foo")
stage2 = run_copy("foo", "bar", name="copy-foo-bar")
tmp_dir.commit([s.outs[0].fspath for s in (stage1, stage2)], msg="add")
index = Index(dvc)
assert index.fs == dvc.fs
assert len(index) == len(index.stages) == 2
assert set(index.stages) == set(index) == {stage1, stage2}
assert stage1 in index
assert stage2 in index
assert index.outs_graph
assert index.graph
assert index.build_graph()
assert isinstance(index.outs_trie, Trie)
assert index.identifier
index.check_graph()
def test_repr(tmp_dir, scm, dvc):
tmp_dir.dvc_gen("foo", "foo", commit="add foo")
brancher = dvc.brancher([scm.get_rev()])
rev = next(brancher)
assert rev == "workspace"
assert repr(Index(dvc)) == f"Index({dvc}, fs@{rev})"
rev = next(brancher)
assert rev == scm.get_rev()
assert repr(Index(dvc)) == f"Index({dvc}, fs@{rev[:7]})"
def test_filter_index(tmp_dir, dvc, run_copy):
tmp_dir.dvc_gen("foo", "foo")
stage2 = run_copy("foo", "bar", name="copy-foo-bar")
def filter_pipeline(stage):
return bool(stage.cmd)
filtered_index = Index(dvc).filter(filter_pipeline)
assert list(filtered_index) == [stage2]
def test_slice_index(tmp_dir, dvc):
tmp_dir.gen({"dir1": {"foo": "foo"}, "dir2": {"bar": "bar"}})
with (tmp_dir / "dir1").chdir():
(stage1,) = dvc.add("foo")
with (tmp_dir / "dir2").chdir():
(stage2,) = dvc.add("bar")
index = Index(dvc)
sliced = index.slice("dir1")
assert set(sliced) == {stage1}
assert sliced.stages is not index.stages # sanity check
sliced = index.slice(tmp_dir / "dir1")
assert set(sliced) == {stage1}
sliced = index.slice("dir2")
assert set(sliced) == {stage2}
with (tmp_dir / "dir1").chdir():
sliced = index.slice(relpath(tmp_dir / "dir2"))
assert set(sliced) == {stage2}
def outputs_equal(actual, expected):
actual, expected = list(actual), list(expected)
def sort_fn(output):
return output.fspath
assert len(actual) == len(expected)
pairs = zip(sorted(actual, key=sort_fn), sorted(expected, key=sort_fn))
assert all(actual.fspath == expected.fspath for actual, expected in pairs)
return True
def test_deps_outs_getters(tmp_dir, dvc, run_copy_metrics):
(foo_stage,) = tmp_dir.dvc_gen({"foo": "foo"})
tmp_dir.gen({"params.yaml": "param: 100\n"})
tmp_dir.gen({"m_temp.yaml": str(5)})
run_stage1 = run_copy_metrics(
"m_temp.yaml",
"m.yaml",
metrics=["m.yaml"],
params=["param"],
name="copy-metrics",
)
_write_json(tmp_dir, [{"a": 1, "b": 2}, {"a": 2, "b": 3}], "metric_t.json")
run_stage2 = run_copy_metrics(
"metric_t.json",
"metric.json",
plots_no_cache=["metric.json"],
name="copy-metrics2",
)
index = Index(dvc)
stages = [foo_stage, run_stage1, run_stage2]
(metrics,) = run_stage1.outs
_, params = run_stage1.deps
(plots,) = run_stage2.outs
expected_outs = chain.from_iterable([stage.outs for stage in stages])
expected_deps = chain.from_iterable([stage.deps for stage in stages])
assert outputs_equal(index.outs, expected_outs)
assert outputs_equal(index.deps, expected_deps)
assert outputs_equal(index.decorated_outputs, [metrics, plots])
assert outputs_equal(index.metrics, [metrics])
assert outputs_equal(index.plots, [plots])
assert outputs_equal(index.params, [params])
def test_add_update(dvc):
"""Test that add/update overwrites existing stages with the new ones.
The old stages and the new ones might have same hash, so we are
making sure that the old stages were removed and replaced by new ones
using `id`/`is` checks.
"""
index = Index(dvc)
new_stage = Stage(dvc, path="path1")
new_index = index.add(new_stage)
assert not index.stages
assert new_index.stages == [new_stage]
dup_stage1 = Stage(dvc, path="path1")
dup_stage2 = Stage(dvc, path="path2")
dup_index = index.update([dup_stage1, dup_stage2])
assert not index.stages
assert len(new_index) == 1
assert new_index.stages[0] is new_stage
assert set(map(id, dup_index.stages)) == {id(dup_stage1), id(dup_stage2)}
def assert_index_equal(first, second, strict=True, ordered=True):
assert len(first) == len(second), "Index have different no. of stages"
assert set(first) == set(second), "Index does not have same stages"
if ordered:
assert list(first) == list(
second
), "Index does not have same sequence of stages"
if strict:
assert set(map(id, first)) == set(
map(id, second)
), "Index is not strictly equal"
def test_discard_remove(dvc):
stage = Stage(dvc, path="path1")
index = Index(dvc, stages=[stage])
assert list(index.discard(Stage(dvc, "path2"))) == list(index)
new_index = index.discard(stage)
assert len(new_index) == 0
with pytest.raises(ValueError):
index.remove(Stage(dvc, "path2"))
assert index.stages == [stage]
assert list(index.remove(stage)) == []
def test_difference(dvc):
stages = [Stage(dvc, path=f"path{i}") for i in range(10)]
index = Index(dvc, stages=stages)
new_index = index.difference([*stages[:5], Stage(dvc, path="path100")])
assert index.stages == stages
assert set(new_index) == set(stages[5:])
def test_dumpd(dvc):
stages = [
PipelineStage(dvc, "dvc.yaml", name="stage1"),
Stage(dvc, "path"),
]
index = Index(dvc, stages=stages)
assert index.dumpd() == {"dvc.yaml:stage1": {}, "path": {}}
assert index.identifier == "d43da84e9001540c26abf2bf4541c275"
def test_unique_identifier(tmp_dir, dvc, scm, run_copy):
dvc.config["core"]["autostage"] = True
tmp_dir.dvc_gen("foo", "foo")
run_copy("foo", "bar", name="copy-foo-bar")
revs = []
n_commits = 5
for i in range(n_commits):
# create a few empty commits
scm.commit(f"commit {i}")
revs.append(scm.get_rev())
assert len(set(revs)) == n_commits # the commit revs should be unique
ids = []
for _ in dvc.brancher(revs=revs):
index = Index(dvc)
assert index.stages
ids.append(index.identifier)
# we get "workspace" as well from the brancher by default
assert len(revs) + 1 == len(ids)
possible_ids = {
True: "2ba7c7c5b395d4211348d6274b869fc7",
False: "8406970ad2fcafaa84d9310330a67576",
}
assert set(ids) == {possible_ids[os.name == "posix"]}
def test_skip_graph_checks(dvc, mocker):
# See https://github.com/iterative/dvc/issues/2671 for more info
mock_build_graph = mocker.spy(Index, "build_graph")
# sanity check
Index(dvc).check_graph()
assert mock_build_graph.called
mock_build_graph.reset_mock()
# check that our hack can be enabled
dvc._skip_graph_checks = True
Index(dvc).check_graph()
assert not mock_build_graph.called
mock_build_graph.reset_mock()
# check that our hack can be disabled
dvc._skip_graph_checks = False
Index(dvc).check_graph()
assert mock_build_graph.called