Files
dvc/dvc/command/plots.py
T
Ruslan Kuprieiev 09136f2378 plots: add plot markers to DVC files (#3807)
* run: add --plot/--plot-no-cache

Part of #3409

* plot: move show/diff to API

* plots: show marked plots by default

Involves some refactoring to make plots comply with the rest of the code
base.

* dvc.yaml: use top-level metrics and plots

* dvc.yaml: add support for plot template

* plots: add support for templates in dvc.yaml

* dvc.yaml: allow metrics/plots to have persist/cache

* plots: render single page by-default and introduce --show-json

* plot: use "working tree" instead of "workspace"

Just to sync this with the rest of the codebase. We should consider
renaming it to "workspace" everywhere, but for now I opt to not touch
it to not break something that depends on it.

* plots: rename -f|--file to -o|--out

Better corresponds to other commands like `import`.

* plots: use RepoTree and brancher instead of api

* stage: get rid of OutputParams

* tests: plots: add simple diff test

* plots: use `--targets` instead of `--datafile`

Makes it comply with `dvc metrics/params` CLI options.

* tests: unit: plots: add --show-json test

* stage: cleanup exception for format error

Based on feedback from the users.

* lockfile: use relpath in corruption error
2020-05-20 04:48:53 +03:00

230 lines
6.8 KiB
Python

import argparse
import logging
import os
from dvc.command.base import CmdBase, append_doc_link, fix_subparsers
from dvc.exceptions import DvcException
logger = logging.getLogger(__name__)
PAGE_HTML = """<!DOCTYPE html>
<html>
<head>
<title>DVC Plot</title>
<script src="https://cdn.jsdelivr.net/npm/[email protected]"></script>
<script src="https://cdn.jsdelivr.net/npm/[email protected]"></script>
<script src="https://cdn.jsdelivr.net/npm/[email protected]"></script>
</head>
<body>
{divs}
</body>
</html>"""
DIV_HTML = """<div id = "{id}"></div>
<script type = "text/javascript">
var spec = {vega_json};
vegaEmbed('#{id}', spec);
</script>"""
class CmdPlots(CmdBase):
def _func(self, *args, **kwargs):
raise NotImplementedError
def run(self):
fields = None
jsonpath = None
if self.args.select:
if self.args.select.startswith("$"):
jsonpath = self.args.select
else:
fields = set(self.args.select.split(","))
try:
plots = self._func(
targets=self.args.targets,
template=self.args.template,
fields=fields,
x_field=self.args.x,
y_field=self.args.y,
path=jsonpath,
csv_header=not self.args.no_csv_header,
title=self.args.title,
x_title=self.args.xlab,
y_title=self.args.ylab,
)
if self.args.show_json:
import json
logger.info(json.dumps(plots))
return 0
divs = [
DIV_HTML.format(id=f"plot{i}", vega_json=plot)
for i, plot in enumerate(plots.values())
]
html = PAGE_HTML.format(divs="\n".join(divs))
path = self.args.out or "plots.html"
with open(path, "w") as fobj:
fobj.write(html)
logger.info(
"file://{}".format(os.path.join(self.repo.root_dir, path))
)
except DvcException:
logger.exception("")
return 1
return 0
class CmdPlotsShow(CmdPlots):
def _func(self, *args, **kwargs):
return self.repo.plots.show(*args, **kwargs)
class CmdPlotsDiff(CmdPlots):
def _func(self, *args, **kwargs):
return self.repo.plots.diff(*args, revs=self.args.revisions, **kwargs)
def add_parser(subparsers, parent_parser):
PLOTS_HELP = (
"Generating plots for metrics stored in structured files "
"(JSON, CSV, TSV)."
)
plots_parser = subparsers.add_parser(
"plots",
parents=[parent_parser],
description=append_doc_link(PLOTS_HELP, "plots"),
help=PLOTS_HELP,
formatter_class=argparse.RawDescriptionHelpFormatter,
)
plots_subparsers = plots_parser.add_subparsers(
dest="cmd",
help="Use `dvc plots CMD --help` to display command-specific help.",
)
fix_subparsers(plots_subparsers)
SHOW_HELP = "Generate a plots image file from a metrics file."
plots_show_parser = plots_subparsers.add_parser(
"show",
parents=[parent_parser],
description=append_doc_link(SHOW_HELP, "plots/show"),
help=SHOW_HELP,
formatter_class=argparse.RawDescriptionHelpFormatter,
)
plots_show_parser.add_argument(
"-t",
"--template",
nargs="?",
default=None,
help="File to be injected with data.",
)
plots_show_parser.add_argument(
"-o", "--out", default=None, help="Destination path to save plots to.",
)
plots_show_parser.add_argument(
"-s",
"--select",
default=None,
help="Choose which field(s) or JSONPath to include in the plots.",
)
plots_show_parser.add_argument(
"-x", default=None, help="Field name for x axis."
)
plots_show_parser.add_argument(
"-y", default=None, help="Field name for y axis."
)
plots_show_parser.add_argument(
"--no-csv-header",
action="store_true",
default=False,
help="Required when CSV or TSV datafile does not have a header.",
)
plots_show_parser.add_argument(
"--show-json",
action="store_true",
default=False,
help="Show output in JSON format.",
)
plots_show_parser.add_argument("--title", default=None, help="Plot title.")
plots_show_parser.add_argument(
"--xlab", default=None, help="X axis title."
)
plots_show_parser.add_argument(
"--ylab", default=None, help="Y axis title."
)
plots_show_parser.add_argument(
"targets",
nargs="*",
help="Metrics files to visualize. Shows all plots by default.",
)
plots_show_parser.set_defaults(func=CmdPlotsShow)
PLOTS_DIFF_HELP = (
"Plot differences in metrics between commits in the DVC "
"repository, or between the last commit and the workspace."
)
plots_diff_parser = plots_subparsers.add_parser(
"diff",
parents=[parent_parser],
description=append_doc_link(PLOTS_DIFF_HELP, "plots/diff"),
help=PLOTS_DIFF_HELP,
formatter_class=argparse.RawDescriptionHelpFormatter,
)
plots_diff_parser.add_argument(
"-t",
"--template",
nargs="?",
default=None,
help="File to be injected with data.",
)
plots_diff_parser.add_argument(
"--targets",
nargs="*",
help="Metrics file to visualize. Shows all plots by default.",
)
plots_diff_parser.add_argument(
"-o", "--out", default=None, help="Destination path to save plots to.",
)
plots_diff_parser.add_argument(
"-s",
"--select",
default=None,
help="Choose which field(s) or JSONPath to include in the plot.",
)
plots_diff_parser.add_argument(
"-x", default=None, help="Field name for x axis."
)
plots_diff_parser.add_argument(
"-y", default=None, help="Field name for y axis."
)
plots_diff_parser.add_argument(
"--no-csv-header",
action="store_true",
default=False,
help="Provided CSV ot TSV datafile does not have a header.",
)
plots_diff_parser.add_argument(
"--show-json",
action="store_true",
default=False,
help="Show output in JSON format.",
)
plots_diff_parser.add_argument("--title", default=None, help="Plot title.")
plots_diff_parser.add_argument(
"--xlab", default=None, help="X axis title."
)
plots_diff_parser.add_argument(
"--ylab", default=None, help="Y axis title."
)
plots_diff_parser.add_argument(
"revisions", nargs="*", default=None, help="Git commits to plot from",
)
plots_diff_parser.set_defaults(func=CmdPlotsDiff)