Files
dvc/dvc/objects/__init__.py
T

315 lines
9.0 KiB
Python

import itertools
import json
import logging
from concurrent import futures
from dvc.dir_info import DirInfo
from dvc.exceptions import DvcException
from dvc.progress import Tqdm
from .stage import get_hash
logger = logging.getLogger(__name__)
class ObjectError(DvcException):
pass
class ObjectFormatError(ObjectError):
pass
class HashFile:
def __init__(self, path_info, fs, hash_info):
self.path_info = path_info
self.fs = fs
self.hash_info = hash_info
def __len__(self):
return 1
def __str__(self):
return f"object {self.hash_info}"
def __bool__(self):
return bool(self.hash_info)
def check(self, odb):
actual = get_hash(self.path_info, self.fs, odb.fs.PARAM_CHECKSUM)
logger.trace(
"cache '%s' expected '%s' actual '%s'",
self.path_info,
self.hash_info,
actual,
)
assert actual.name == self.hash_info.name
if actual.value.split(".")[0] != self.hash_info.value.split(".")[0]:
raise ObjectFormatError(f"{self} is corrupted")
@classmethod
def load(cls, odb, hash_info):
return odb.get(hash_info)
def save(self, odb, **kwargs):
odb.add(self.path_info, self.fs, self.hash_info, **kwargs)
class File(HashFile):
def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
self.src = None
@classmethod
def stage(cls, odb, path_info, fs, **kwargs):
hash_info = get_hash(path_info, fs, odb.fs.PARAM_CHECKSUM, **kwargs)
raw = odb.get(hash_info)
obj = cls(raw.path_info, raw.fs, hash_info)
obj.src = HashFile(path_info, fs, hash_info)
return obj
def save(self, odb, **kwargs):
self.src.save(odb, **kwargs)
class Tree(HashFile):
def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
self.src_hash_info = None
self.src_path_info = None
self.src_fs = None
def __len__(self):
return self.hash_info.dir_info.nfiles
def __iter__(self):
for (
key,
hash_info,
) in self.hash_info.dir_info.trie.iteritems(): # noqa: B301
yield (key, hash_info)
@classmethod
def save_dir_info(cls, odb, dir_info, hash_info=None):
if hash_info and hash_info.name == odb.fs.PARAM_CHECKSUM:
try:
odb.check(hash_info)
assert hash_info.dir_info == dir_info
return hash_info
except (FileNotFoundError, ObjectFormatError):
pass
from dvc.fs.memory import MemoryFileSystem
from dvc.path_info import PathInfo
from dvc.utils import tmp_fname
fs = MemoryFileSystem(None, {})
path_info = PathInfo(tmp_fname(""))
with fs.open(path_info, "w") as fobj:
json.dump(dir_info.to_list(), fobj, sort_keys=True)
tmp_info = odb.fs.path_info / tmp_fname("")
with fs.open(path_info, "rb") as fobj:
odb.fs.upload_fobj(fobj, tmp_info)
hash_info = get_hash(tmp_info, odb.fs, odb.fs.PARAM_CHECKSUM)
hash_info.value += odb.fs.CHECKSUM_DIR_SUFFIX
hash_info.dir_info = dir_info
hash_info.nfiles = dir_info.nfiles
odb.add(tmp_info, odb.fs, hash_info)
return hash_info
@classmethod
def stage(cls, odb, path_info, fs, **kwargs):
hash_info = get_hash(path_info, fs, odb.fs.PARAM_CHECKSUM, **kwargs)
hi = cls.save_dir_info(odb, hash_info.dir_info, hash_info)
hi.size = hash_info.size
raw = odb.get(hi)
obj = cls(raw.path_info, raw.fs, hi)
obj.src_hash_info = hash_info
obj.src_path_info = path_info
obj.src_fs = fs
return obj
@classmethod
def load(cls, odb, hash_info):
obj = odb.get(hash_info)
try:
with obj.fs.open(obj.path_info, "r") as fobj:
raw = json.load(fobj)
except ValueError as exc:
raise ObjectFormatError(f"{obj} is corrupted") from exc
if not isinstance(raw, list):
logger.error(
"dir cache file format error '%s' [skipping the file]",
obj.path_info,
)
raise ObjectFormatError(f"{obj} is corrupted")
dir_info = DirInfo.from_list(raw)
hash_info.dir_info = dir_info
hash_info.nfiles = dir_info.nfiles
return cls(obj.path_info, obj.fs, hash_info)
def save(self, odb, **kwargs):
assert self.src_hash_info.dir_info
hi = self.save_dir_info(
odb, self.src_hash_info.dir_info, self.hash_info
)
for entry_info, entry_hash in Tqdm(
hi.dir_info.items(self.src_path_info),
desc="Saving " + self.src_path_info.name,
unit="file",
):
entry_obj = HashFile(entry_info, self.src_fs, entry_hash)
entry_obj.save(odb, **kwargs)
self.src_fs.state.save(self.src_path_info, hi)
def filter(self, odb, prefix):
hash_info = self.hash_info.dir_info.trie.get(prefix)
if hash_info:
return load(odb, hash_info)
depth = len(prefix)
dir_info = DirInfo()
try:
for key, value in self.hash_info.dir_info.trie.items(prefix):
dir_info.trie[key[depth:]] = value
except KeyError:
return None
return load(odb, self.save_dir_info(odb, dir_info))
def save(odb, obj, **kwargs):
obj.save(odb, **kwargs)
def check(odb, obj):
odb.check(obj.hash_info)
if isinstance(obj, Tree):
for _, hash_info in obj:
odb.check(hash_info)
def load(odb, hash_info):
if hash_info.isdir:
return Tree.load(odb, hash_info)
return File.load(odb, hash_info)
def _get_dir_size(odb, dir_info):
try:
return sum(
odb.fs.getsize(odb.hash_to_path_info(hi.value))
for _, hi in dir_info.items()
)
except FileNotFoundError:
return None
def merge(odb, ancestor_info, our_info, their_info):
assert our_info
assert their_info
if ancestor_info:
ancestor = load(odb, ancestor_info).hash_info.dir_info
else:
ancestor = DirInfo()
our = load(odb, our_info).hash_info.dir_info
their = load(odb, their_info).hash_info.dir_info
merged = our.merge(ancestor, their)
hash_info = Tree.save_dir_info(odb, merged)
hash_info.size = _get_dir_size(odb, merged)
return hash_info
def _transfer_file(odb, from_fs, from_info):
from dvc.utils import tmp_fname
from dvc.utils.stream import HashedStreamReader
tmp_info = odb.fs.path_info / tmp_fname()
with from_fs.open(
from_info, mode="rb", chunk_size=from_fs.CHUNK_SIZE
) as stream:
stream_reader = HashedStreamReader(stream)
# Since we don't know the hash beforehand, we'll
# upload it to a temporary location and then move
# it.
odb.fs.upload_fobj(
stream_reader,
tmp_info,
total=from_fs.getsize(from_info),
desc=from_info.name,
)
hash_info = stream_reader.hash_info
return tmp_info, hash_info
def _transfer_directory_contents(odb, from_fs, from_info, jobs, pbar):
rel_path_infos = {}
from_infos = from_fs.walk_files(from_info)
def create_tasks(executor, amount):
for entry_info in itertools.islice(from_infos, amount):
pbar.total += 1
task = executor.submit(
pbar.wrap_fn(_transfer_file), odb, from_fs, entry_info
)
rel_path_infos[task] = entry_info.relative_to(from_info)
yield task
pbar.total = 0
with futures.ThreadPoolExecutor(max_workers=jobs) as executor:
tasks = set(create_tasks(executor, jobs * 5))
while tasks:
done, tasks = futures.wait(
tasks, return_when=futures.FIRST_COMPLETED
)
tasks.update(create_tasks(executor, len(done)))
for task in done:
yield rel_path_infos.pop(task), task.result()
def _transfer_directory(odb, from_fs, from_info, jobs, no_progress_bar=False):
dir_info = DirInfo()
with Tqdm(total=1, unit="Files", disable=no_progress_bar) as pbar:
for (
entry_info,
(entry_tmp_info, entry_hash),
) in _transfer_directory_contents(odb, from_fs, from_info, jobs, pbar):
odb.add(entry_tmp_info, odb.fs, entry_hash)
dir_info.trie[entry_info.parts] = entry_hash
return Tree.save_dir_info(odb, dir_info)
def transfer(odb, from_fs, from_info, jobs=None, no_progress_bar=False):
jobs = jobs or min((from_fs.jobs, odb.fs.jobs))
if from_fs.isdir(from_info):
return _transfer_directory(
odb,
from_fs,
from_info,
jobs=jobs,
no_progress_bar=no_progress_bar,
)
tmp_info, hash_info = _transfer_file(odb, from_fs, from_info)
odb.add(tmp_info, odb.fs, hash_info)
return hash_info