1247 Commits
Author SHA1 Message Date
dberenbaum 4385720fab exp init: update tests 2021-12-07 07:34:31 +05:45
Saugat Pachhai (सौगात) 389fd48b5a exp init: change type to --type=live to --type=dl 2021-12-07 05:56:23 +05:45
Ruslan Kuprieiev b6f2a8e653 tests: remove redundant remote tests
With introduction of https://github.com/iterative/dvc-plugins,
all important tests are being ran there, so there is no need
for dvc repo to run them again.

This PR also removes some redundant/broken remote tests.
2021-12-03 22:45:41 +02:00
Ruslan Kuprieiev 09f48a5aaa tests: introduce dvc.testing
This is a very early version of test utils for dvc plugins. This module
consists of existing tests with minimal changes and is going to evolve
a lot as our plugins are getting filled in and pytest-test-utils matures.
2021-12-02 09:08:40 +02:00
Saugat Pachhai (सौगात) ea52ab2260 remove dvc.scm and dvc.fs.git module; rename dvc.fs.scm to dvc.fs.git 2021-11-25 19:09:58 +02:00
Saugat Pachhai (सौगात) 95c726b297 fs.git: refactor GitFileSystem to be fsspec compliant
Also adds a wrapper for DVC to use as GitFileSystem in dvc.fs.scm.
This is temporary, and will be renamed back to dvc.fs.git after the
split.

Note that this filesystem is not fully compliant, it's only
meant to be compatible with our previous implementation.
2021-11-25 08:32:20 +05:45
Saugat Pachhai (सौगात) a282e0e48c scm: restructure scm
Makes it easier to decouple, we'd only need to rename
dvc/scm/__init__.py to dvc/scm.py.
2021-11-24 11:46:40 +05:45
Saugat Pachhai (सौगात) 48581715b6 scm: remove exp related behaviours from scm.resolve_rev 2021-11-24 11:39:39 +05:45
Saugat Pachhai (सौगात) a0f4e12fb4 scm: unified progress reporting in a structured way
This adds a support for reporting progress from Git in a structured
format. The gitpython already provides somewhat structured progress
reporting, dulwich on the other hand only provides git-like line
messages.

As gitpython uses git binary, it already parse this line format
in a structured way. This PR makes dulwich use the same machinery
to unify progress reporting for both dulwich and gitpython python.

This does add a dependency on gitpython even on dulwich backend,
so I am iffy if we should do this.
The alternative is to translate gitpython's progress reports to
string, and just use string messages as progress reports on both
dulwich and gitpython.
2021-11-23 19:50:12 +02:00
Saugat Pachhai (सौगात) 568abb3e28 scm: remove dependency from DvcException 2021-11-23 13:19:41 +02:00
Saugat Pachhai (सौगात) e07b99ed33 tests: increase timeout to 2 second for prompts test 2021-11-22 15:10:55 +05:45
Saugat Pachhai (सौगात) 7bc906011f tests: timeout only on functions, excluding tests fixtures
Sometimes, `tmp_dir` fixtures take longer than a second. Using `func_only`
makes it only consider duration of test function run, excluding fixtures
duration.
2021-11-22 15:10:55 +05:45
Saugat Pachhai (सौगात) b84227db89 scm: remove ignore list 2021-11-22 07:16:54 +02:00
David de la Iglesia Castro 318b269ad1 live: Call webbrowser.open.
Use `funcy.once_per_args` decorator to prevent opening the html multiple times if user closes first time.

Closes iterative/dvclive#180
2021-11-22 03:35:23 +02:00
Saugat Pachhai (सौगात) bf313d92aa exp init: timeout prompts' test
The `exp init` tests may just keep waiting on the prompts blocking tests.
The blocking of prompts is likely a failure in tests setup or a bug
in the implementation. It's hard to find out these failures or avoid it.
If they take longer than 1 second, they most likely have failed as
most of test takes 0.1 second at max.
2021-11-22 03:27:16 +02:00
Saugat Pachhai (सौगात) cb941a836d tests: cover exp init 2021-11-19 18:58:23 +05:45
Saugat Pachhai (सौगात) 93e6526907 scm: split tracking of to-be git-ignored/git-staged into SCMContext 2021-11-18 15:34:45 +02:00
karajan1001 068b8371aa Machine: table output for machine status(#6892)
Change the output format of `dvc machine status` command to tables for a
better readability.
2021-11-18 11:22:13 +08:00
karajan1001 888b6392bb Machine:remove field name in config(#6892)
Because our machine name now is the key value of the machine config
dict. And the machine config value will been overwritten by it when the
config is loaded. We can remove the field `name` from the config.
2021-11-18 11:22:13 +08:00
karajan1001 b24a31b834 Machine: use table for list outputs(#6892)
fix: #6892

Current output of machine list is quite urgly, it is originaly used to
show configurations. In this PR, we use a new table format for it.
2021-11-18 11:22:13 +08:00
karajan1001andDave Berenbaum f43c04f935 Make machine status name optional
fix: #6838
1. make machine status name optional.
2. show all machine status if no name provide.
3. UI changes for this cmd.
4. add a new test for it.

Co-authored-by: Dave Berenbaum <[email protected]>
2021-11-17 15:44:36 +08:00
Ruslan Kuprieiev 88660f6a66 dvc: use transfer in checkout/doctor/odb
All three of those use more or less the same logic for testing different
link types and maybe then using them. So now instead of having 3
implementations, we'll have just one.

Filesystem `transfer` now will not try to catch particular errno's, but
instead will just ignore any OSError and move down to the next link type
to try out, and if the last one fails - it will raise the last exception,
so if it is a common problem - we'll be able to see it.

This patch also removes `odb.confirmed_cache_type`, as it was caching
link type that is not really a cache-level thing, but rather a checkout thing,
that should only be cached for particular objects we are linking, as multiple
objects could be linked to different filesystems from the same odb (e.g.
external local output on hdd and local data on your ssd).

Next step here will be to introduce metadata diff, so that we can get rid of
temporary Link wrapper and introduce Transfer and corresponding transfer
config, that will know what links to use and could have some other things
like callbacks, so we don't continue passing dozens of kwargs along the stack.

Continuing from #6963

Fixes #6980
2021-11-15 22:50:00 +02:00
David de la Iglesia Castro 4a1985d7cd dvc render: Add RENDERERS registry.
Related: #6840, #4455, #6943
2021-11-15 16:37:24 +01:00
David de la Iglesia Castro c8903dc3a6 live: Add test for logging images with dvclive
Closes iterative/dvclive#190
2021-11-15 12:47:02 +01:00
Paweł Redzyński 36ed182f26 argparse: dont override cmd
Related: #6956, https://bugs.python.org/issue45235
2021-11-11 01:14:03 +02:00
David de la Iglesia Castro 72066f233b exp show: Add --only-changed option.
Use TabularData `drop_duplicates` to only show metrics/params with values varying across the selected experiments.

Fixes #5966
2021-11-10 16:52:18 +02:00
Batuhan Taskaya 9aec8f1926 dvc: get rid of path_info
Intermediate PR in removing path_info from our code base.

It is completely removed from the main codebase and is still
being used in tests, which will be migrated in the followups.

For fs-specific simple path manipulation, we've introduced
`fs.path` helper (similar to `os.path`).

Fixes #6774
2021-11-10 00:52:48 +02:00
Ruslan Kuprieiev 922eb20e44 staging: don't use move 2021-10-27 20:19:17 +03:00
Peter Rowlands (변기호) 0d895e2661 exp: add initial ssh executor (#6833)
* executor: move local specific git initialization out of base

* machine: return kwargs for executor init instead of executor object

* executor: add initial ssh executor

* ssh-executor: disable strict host checking for dvc-machine instances

* initial tests for ssh executor

* drop GIT_SSH_COMMAND usage

* push: accept destination odb as a parameter

* separate cache initialization into executor.init_cache

* add test for ssh executor cache init

* remove dead code

* machine: fixture-ize default test scenarios

* test SSHExecutor.from_machine

* tpi: return default SSH port for constructing executors
2021-10-26 16:08:17 +09:00
GaoandPeter Rowlands c07592131a exp run: add experiment name check. (#6848)
* Add experiment name check.

1. Add experiment name check (https://git-scm.com/docs/git-check-ref-format)
2. Add duplicate exp name check.
3. Add some unit test for it.

* Ban slash / in dvc exp names

* Use dulwich backend for ref name checking

* Some bug fix

* Update dvc/repo/experiments/__init__.py

Co-authored-by: Peter Rowlands (변기호) <[email protected]>

* Update dvc/repo/experiments/__init__.py

Co-authored-by: Peter Rowlands (변기호) <[email protected]>

* Some review changes

* Make some funtion more reusable.

Co-authored-by: Peter Rowlands (변기호) <[email protected]>
2021-10-25 20:16:37 +09:00
Ruslan Kuprieiev 38cbebfb28 fs: transfer: try reflink (#6853)
If supported, reflink, will provide the fastest transfer possible.
That being said, right now we use `move` in most of the places,
which still takes presidence.

Pre-requisite for #6387
2021-10-24 22:46:02 +03:00
Ruslan Kuprieiev e2d705fd76 link: use proper exceptions (#6852)
* link: use proper exceptions

* system: use ENOTSUP instead of NotImplementedErrorwq
2021-10-23 02:38:17 +03:00
Saugat Pachhai 719e93192f move scm.install to dvc.install (#6849)
scm.install does 3 different things, and all of those are
very much tied to DVC. So, as we are splitting scm out,
it should now belong to `dvc.install`.
2021-10-22 14:53:33 +03:00
Peter Rowlands (변기호) 73f2fa8c93 git: use asyncssh as dulwich SSH vendor (#6797)
* git: support client kwargs for auth in remote methods

* tests: use docker for git/ssh server

* move dulwich backend into subdir

* add base sync<->async support

* dulwich: add initial asyncssh SSH vendor

* dulwich: use asyncssh as the default SSH vendor

* add test for git over ssh

* test read (fetch) over ssh

* ci: re-enable ssh tests

temporary workaround for #6788, #6789

* move async stubs into dvc.scm.asyn

* tests: use sshfs and not dvc.fs.ssh

* allow explicit 0-length read in asyncssh vendor
2021-10-21 14:36:45 +09:00
b652670cbf Dependabot/pip/pylint 2.11.1 (#6843)
* build(deps): Bump pylint from 2.9.6 to 2.11.1

Bumps [pylint](https://github.com/PyCQA/pylint) from 2.9.6 to 2.11.1.
- [Release notes](https://github.com/PyCQA/pylint/releases)
- [Changelog](https://github.com/PyCQA/pylint/blob/main/ChangeLog)
- [Commits](https://github.com/PyCQA/pylint/compare/v2.9.6...v2.11.1)

---
updated-dependencies:
- dependency-name: pylint
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>

* fix pylint problems

* Updation after rebase.

* system: use binary mode

* Set remote execution script encoding type locale

* Update dvc/machine/__init__.py

Co-authored-by: Peter Rowlands (변기호) <[email protected]>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Ruslan Kuprieiev <[email protected]>
Co-authored-by: Peter Rowlands (변기호) <[email protected]>
2021-10-20 14:34:10 +03:00
Gao 6de3e734ed Revert "build(deps): Bump pylint from 2.9.6 to 2.11.1 (#6636)" (#6842)
This reverts commit 464620806c.
2021-10-20 12:41:00 +03:00
Gao 4b2bec89ec dvc machine: add a new command rename to it (#6633)
* `dvc machine`: add a new command `rename` to it

fix #6481
1. add new command `dvc machine rename`
2. add a unit test for the call.
3. add several functional tests for it.t push myself fix6481

* Move rename logic to tpi

* use tpi.state_mv instead of rename

* Rebase to a newer version

* Update tpi version

* Remove unused assert and try catch
2021-10-20 15:57:44 +09:00
Saugat Pachhai 6c0bc9563c enable pywin32 for Python3.10, make it an optional dependency (#6841) 2021-10-20 11:25:00 +05:45
464620806c build(deps): Bump pylint from 2.9.6 to 2.11.1 (#6636)
* build(deps): Bump pylint from 2.9.6 to 2.11.1

Bumps [pylint](https://github.com/PyCQA/pylint) from 2.9.6 to 2.11.1.
- [Release notes](https://github.com/PyCQA/pylint/releases)
- [Changelog](https://github.com/PyCQA/pylint/blob/main/ChangeLog)
- [Commits](https://github.com/PyCQA/pylint/compare/v2.9.6...v2.11.1)

---
updated-dependencies:
- dependency-name: pylint
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>

* fix pylint problems
* system: use binary mode

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: karajan1001 <[email protected]>
Co-authored-by: Ruslan Kuprieiev <[email protected]>
2021-10-20 10:32:44 +08:00
Matthew Beckers 26f435a433 exp run: throw error if new parameters are added by --set-param (#6521)
* throw error if new parameters are added by dvc run exp -S

Throws an error if dvc run exp --set-param references a parameter key path
that is not in the target config file. This is done to prevent silent errors
in experimentation when new params are accidentally added instead of modifying
current ones due to typos.

This implementation is based on initial suggestions in issue #5477.

* fix mypy confusion from overwriting a var

* tests: remove modify param test that was adding params

One of the test in test_modify_params was still adding a parameter

* tests: remove param modification during exp run in test_untracked

Spurious usage of modifying a parameter when the params.yaml is not yet existing in test_untracked.

* remove benedict dependency for verifying params

Instead, the keypath util module from benedict is adapted into the dvc codebased and used
natively to verify that a keypath exists within a dict.

* exp: list all invalid param modifications in error message

* exp-run: more specific exception for new params via --set-param

Uses established MissingPramsError instead of DvcException. Modified message to be more similar to other uses of this exception.

* Revert "remove benedict dependency for verifying params"

This reverts commit 6170f16dcc4033667fbacb0d0bc13c60898f58c4.

* exp: use internal benedict import for validating params

* exp: combine new param validation into merge_params

Moves new param validation into existing merge_params function as an optional check

* exp: minor ammendments to error message

* Revert "tests: remove param modification during exp run in test_untracked"

This reverts commit c9eb1a62af58586509ded362cc79e75ddc4b119c.

* exp: fix test_untracked to not fail due to new params

Fixed by creating the params file with the new parameter already present.
2021-10-19 17:46:36 +09:00
966dc8a1ca machine: Add a new command dvc machine status (#6649)
* machine: Add a new command `dvc machine status`

fix#6482
1. add a new command `dvc machien status`
2. add a unit test for the cli call.
3. add a unit test for the shown result.

* Update dvc/command/machine.py

Co-authored-by: Saugat Pachhai <[email protected]>

* Update dvc/command/machine.py

Co-authored-by: Saugat Pachhai <[email protected]>

* Update machine.py

* Remove sensitive fields

* Update dvc/machine/__init__.py

Co-authored-by: Casper da Costa-Luis <[email protected]>

* Update tests/func/machine/__init__.py

Co-authored-by: Casper da Costa-Luis <[email protected]>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Use white list to limit shown fields

Co-authored-by: Saugat Pachhai <[email protected]>
Co-authored-by: Casper da Costa-Luis <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2021-10-19 17:38:11 +09:00
eggqq007andZhenyu Gao 6d96ecb376 dvcfs: handle new workspace subdirectories in walk (#6811)
1. add try-catch to catch KeyError exception while walking dvc folder
2. Fix #6695

Co-authored-by: Zhenyu Gao <[email protected]>
2021-10-19 17:33:02 +09:00
David de la Iglesia Castro 4f16852005 exp/metrics/params diff: Replaced Old/New with a_rev/b_rev (#6814)
* Replaced Old/New with a_rev/b_rev

* Fixed tests
2021-10-18 21:09:02 +03:00
Paweł Redzyński db75878bef plots: make generator out of collect (#6793) 2021-10-15 17:24:02 +03:00
Michael Lingelbach 0ae9130052 dvc: add 'repos' list to pre-commit config if it does not exist (#6795) 2021-10-13 22:50:25 +03:00
Saugat PachhaiandRuslan Kuprieiev 8abda93e3e use setuptools_scm and build_requires (#6775)
* use setuptools_scm and build_requires

* remove kwargs from setup.py

* fix tests; fetch in depth in github actions

* use build to build sdist/wheel

* try updating pip and setuptools

* update pip

* remove or unpin wheel

* bring back the version in pyinstaller

* Update scripts/build.py

Co-authored-by: Ruslan Kuprieiev <[email protected]>
2021-10-12 17:58:14 +03:00
Ruslan Kuprieiev 5cfe61928e tree: use oids instead of objects (#6785) 2021-10-12 05:39:10 +03:00
Ruslan Kuprieiev 32467ada32 objects: extract size/nfiles to Meta (#6784)
* stage: capture metadata

* tree: capture metadata

* objects: extract size/nfiles from HashInfo/HashFile/Tree to Meta
2021-10-12 03:06:18 +03:00
dependabot[bot]andPaweł Redzyński d33df60e41 build(deps): Bump dvclive from 0.3.0 to 0.4.0 (#6753)
* build(deps): Bump dvclive from 0.3.0 to 0.4.0

Bumps [dvclive](https://github.com/iterative/dvclive) from 0.3.0 to 0.4.0.
- [Release notes](https://github.com/iterative/dvclive/releases)
- [Commits](https://github.com/iterative/dvclive/compare/0.3.0...0.4.0)

---
updated-dependencies:
- dependency-name: dvclive
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>

* live: adjust tests to dvclive==0.4.0

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Paweł Redzyński <[email protected]>
2021-10-08 07:02:54 +05:45
David de la Iglesia CastroandSaugat Pachhai 16f404b16a Fix dvclive running subdir (#6740)
* Fix dvclive running subdir

* Apply suggestions from code review

Co-authored-by: Saugat Pachhai <[email protected]>

* Applied suggestions

* Update tests/func/test_live.py

Co-authored-by: Saugat Pachhai <[email protected]>
2021-10-05 13:16:33 +05:45