* stage: support explicit allow_missing in checkout
* exp: explicitly clear EXEC_BRANCH and checkout with allow_missing on
starting experiment run
* git: wrap stash apply errors with SCMError
* git: add `git status` to backends
* exp: reset staged git changes before workspace exp runs to avoid merge
conflicts
* test untracked (and staged) pipeline file and deps for both workspace
and tmpdir runs
* experiments: explicitly track pipeline files and uncached deps for exp
commmits
* fix exp typing errors
* experiments: move executor into a module
* experiments: separate executor into base/local
* rename LocalExecutor to TempDirExecutor, run in .dvc/tmp by default
* git: restore HEAD using reset not checkout in detached_head()
* experiments: support calling BaseExecutor.reproduce directly for
workspace runs
* experiments: run single experiments in local workspace by default
* update experiments tests for workspace changes
* experiments: update checkpoints for workspace runs
* update checkpoints tests
* update test_show
* add force param for apply
* exp apply: add --force option
* exp run/res: add --temp option to force tempdir execution for single
experiments
* force apply in non-apply specific tests
* experiments: add utils.exp_commits for iterating over experiment commits
* repo: add support for all_experiments in brancher and used_cache
* git: make all_commits return commits in standard refs instead of --all
* gc: add --all-experiments to preserve cache for experiments
* update gc tests
* repo: support pushing and fetching specific revs internally
* exp push: push cache for experiment by default
* exp pull: pull cache for experiment by default
* fix empty git repo bug
* [WIP] git: use dulwich for add/commit
* dulwich: add is_tracked implementation
* experiments: try to workaround windows cleanup() bug on py < 3.8
* tests: experiments: convert CRLF to LF before comparing params
* git: fix Stash.push args typing
* experiments: handle case where args file was inadvertently committed to
git
* add test for args file being committed to git
* experiments: commit to refs/exps/... instead of branch heads
* update exp show
* restore checkpoint_resume kwarg
* refactor new() to use experiments stash
* experiments: use refspecs to populate and collect executors
* experiments: use new stash and merge on exp checkout
* experiments: fix executor chdir
* experiments: update run and show
* skip checkout after reproduce
* checkpoints: use experiments refspecs
* check if workspace was stashed before applying
* exp show: unify checkpoint/standalone experiment collection
* git: move iter_refs to backend
* update for scm changes
* experiments: replace exp checkout in favor of exp apply
* git: handle rev_parse errors in resolve_commit
* update refs containing and baseline check
* fix sigint handling for checkpoints
* update checkpoint exists behavior
* fix checkpoint baseline behavior
* update tests
* experiments: update gc
* update show tests
* fix type checking errors
* update diff
* scm: add diff, describe
* experiments: generate human readable names
* exp run/resume: allow user specified exp name with -n/--name
* update tests
* experiments: add `exp branch` for promoting experiment to full branch
* fix test
* fix missing file
* experiments: explicitly close scm instances before cleaning up tmp dir
* tree: use file_mode in upload() for trees that support modes
* experiments: preserve file_mode for files in the workspace
* skip permissions tests on windows
* LocalTree: separate chmod from protect
* fix rebase issue
* experiments: Allow branching from checkpoints with modified hyper params
* experiments: initial checkpoints tree functionality for `exp show`
* go back to flat/sortable view
* add test for resume w/modified params
* tests: move experiments fixtures into conftest
* add show checkpoints test
* test checkpoint table rendering
* remove dead code
* test show for checkpoint branches
* experiments: refactor regular/checkpoint experiment separation
* fix scm_checkout pull bug
* experiments: return stages from executor.reproduce
* since executor has to move to threadpool execution anyways, we no
longer have to work around the pickle repro result limitation
* refactor new/resume behavior
* refactor checkpoints tests
* use -f to force checkpoints reset/restart
* checkpoints: use 'exp run' and 'exp res[ume]' commands
* stage: all outs can be missing for checkpoint stages
* regular outputs may not be written at the time a checkpoint is
generated, but subsequent checkouts of that stage should not fail due
to the missing outs
* commit stage on checkpoint generation otherwise non-persist cached outs
are lost
* checkpoints: wait for stage proc to end after killing via terminate()
* stage: fix issues with killing checkpoint stage
* refactor signaling (use threading.Event instead of Condition)
* fix windows bug (kill all child processes via taskkill)
* experiments: refactor executor collection
* tests: move checkpoint tests into separate module
* refactor experiment tests to use stage fixture
* Allow setting of list parameteres
Check if dict is Mapping or list before using .get()
* Added test for dvc exp run with list paramater
* Add more tests for string parameter modification
* stage: make runs checkpointable
* api: add make_checkpoint API call
* tests: add test for checkpointed stage
* experiments: implement checkpoints callback chain
* initial working state
* use .dvc/tmp for checkpoint signal file location
* force repro for checkpoint experiments
* checkout: add flag to allow missing persistent outputs
(i.e. not yet created)
* use allow_persist_missing on checkpoint experiment repro
* executor: force checkout before checkpoints experiment repro
* move checkpoint commands to `dvc exp run`
* support resuming checkpoint runs with --continue
* fix git bugs
* experiments: include checkpoint commits in `exp show`
* use 1sec sleep timers
* fix apply_workspace test conflict
* tests: add test for `dvc exp run`
* cleanup signal file behavior
* fix bool conversion
* tests: add tests for checkpoint and checkpoint_continue
* fix styling
* fix checkpoint stage test
* fix checkpoint monitor thread condition/notification
* experiments: cleanup show UI
* show git tag/branch names instead of SHAs by default
* make timestamp formatting more like the viewer
* update tests
* place timestamps in their own column
* update command test
* exp: remove unused regex
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* plots: add -e/--experiment option for plots diff
* experiments: add method to get baseline for a given experiment
* plots: default to diff against baseline instead of workspace/head for experiments
* use exact match for experiments RE since name-rev may return relative
commits
* executor: abstract tmpdir population using tree upload
* experiments: unmark flaky test
* fix wrong tree download
* LocalTree: use os.replace instead of os.rename in _upload
* experiments: add initial local tmpdir executor
* fix detached head pull
* experiments: include unchanged (unrepro'd) stages in experiment hash
* experiments: repro single experiment using tmpdir executor by default
* stage experiments as stash commits before running
* include repro args/kwargs in stashed experiments
* support running arbitrary experiment commits (including stash commits)
* experiments: use ProcessPoolExecutor
* experiments: add `dvc exp` alias for `dvc experiments`
* experiments: add `dvc repro --experiment --queue`
* `--queue` can be used to stage an experiment for future execution
* experiments: show queued (unexecuted) experiments in `dvc exp show`
* revert ProcessPoolExecutor change
* experiments: add `dvc repro --run-all [--jobs]`
* `--run-all` can be used to run all queued experiments in parallel
* cleanup output
* experiments: use ProcessPoolExecutor
* fix returning unpicklable objects error
* update tests
* fix windows cleanup issue
* on windows tempdir cannot be removed if we are chdir'd into that
directory
* experiments: add initial experiments.show
* only includes metrics + params (no code/data information)
* experiments: basic `dvc experiments show` functionality
* experiments: clone and run repro inside clone workspace
* repro: add -e/--experiment option
* experiments: hash experiments to identify duplicates
* experiments: update show
* experiments: checkout experiment after running repro
* experiments: add `dvc experiments checkout`
* experiments: add simple `dvc experiments diff` command
* just shows combined output from `metrics diff` and `plots diff` for
now
* add very simple tests
* add some useful output messages
* experiments: suppress help messages while feature is in development
* experiment related commands will be accessible but hidden from the
default command help messages
* add simple experiments command tests
* experiments: disable feature by default
* experiments only enabled in test environment (DVC_TEST) or when
core.experiments config option is true
* use fetch on checkout missing revs
Peter Rowlands (변기호)
Ruslan Kuprieiev
Sami Jawhar
Alexanderandaandrusenko
Saugat Pachhai