* repro: support regex/foreach-group to run at once
Fixes#4912Fixes#4886Fixes#4958
* Use `tree.isdir` rather than `os.path.isdir`
* Use glob rather than regex
* Update dvc/command/repro.py
* s/regex/glob
* disable glob on `collect_granular`
There's no need for a glob here
* add tests for `collect` and `collect_granular`
* addressing: allow stage name addressing without colon
* repo: reorganize imports
* refactor/reorganize collect_granular
* add tests for stage addressing
* fix ds and cc issues
* fix unpack error in test
* tests: stage string representations
* exception: add error message
Also remove `cause` when throwing NoOutputOrStage, as
CheckoutErrorSuggestGit will start chaining all the messages
in cause of the exception.
* rename NoOutputOrStage NoOutputOrStageError
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* drop python 3.5 support
* dvc: remove fspath() use inside os.path calls
* dvc: replace dvc.compat.fspath with os.fspath
* tests: replace dvc.compat.fspath with os.fspath
* utils: relpath() should use fspath/str
* utils: os.readlink doesn't support path-like obj on Windows until 3.8
* dvc: use lockfile as yaml instead of json
* refactor Dvcfile into Pipeline file and Single stage file
* fix tests
* dvc: fix outputs
* add more tests for collection of outputs
* add tests for data cloud/get/import/ls
* tests: test for checkouts
* Allow other checksums other than md5
* tests: use iterdir instead of os.listdir
* cleanup errors reported by cc and ds
* utils: throw DvcException instead of plain Exception
* tests: use yaml.load instead of json.load
* run: split assignments
* Update dvc/stage/exceptions.py
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* dvc: refactor config
Advantages:
- read like a dict
- modify as a dict for testing or manipulation purposes
- wrap modifications into context manager to save them:
with config.edit("local") as conf:
conf["core"]["remote"] = "new-default"
Design decisions:
- dropped string constants
- remote sections are parsed into a simple subdict upon load
- remote config schema is now defined by url scheme
- relative paths are handled transparently upon load/save
- user config and remote manipulations are moved to commands
- same dev manipulations are done by simply modifying a config dict
* test: do not set cache.type for remotes that doesn't support it
* dvc: fix windows absolute paths validation in config
* test: fix windows separate drive test
* dvc: stylistic fixes in config
* state: use ignore file handler when accessing metadata
* fs: don't add dir size to overall size for dir
* ignore: use posix-like path on windows
* ignore: remove tree from dvc_walk arguments
* ignore: handle DvcIgnoreFilter creation outside of DVC repo
* ignore: throw on dvcignore file under output dir, but not dependency dir
* ignore: move ignore initialization to Repo init
* ignore: work in progress
* ignore: work in progress 2
* ignore: throw on .dvcignore upon collecting dir
* ignore: refactor
* ignore: loading upper level ignores in stages()
* Update dvc/repo/__init__.py
Co-Authored-By: Ruslan Kuprieiev <[email protected]>
* dvcignore review refactor
Replaced Path* dataclasses with PathInfo/URLInfo/CloudURLInfo, which
know how parse, serialize, stringify and join themselves. They also
provide useful accessors like part of an url or pathlib.Path like
.parent or .name.
Along the way two families of bugs where fixed and should never occur in
the future:
- paths not matched as strings anymore, e.g. using str.startswith()
- Output.path is eliminated as ambiguous
Both families might had caused undefined surprising behavior when local
and remote paths clash.