Fixes: #3678
When file has been already tracked under git, OutputAlreadyTrackedError gets raised.
This commits add git command suggestions to help user to stop tracking file from git,
so in future commits they can use DVC for the file.
Co-authored-by: Puneetha Pai <[email protected]>
* drop python 3.5 support
* dvc: remove fspath() use inside os.path calls
* dvc: replace dvc.compat.fspath with os.fspath
* tests: replace dvc.compat.fspath with os.fspath
* utils: relpath() should use fspath/str
* utils: os.readlink doesn't support path-like obj on Windows until 3.8
* dvc: use lockfile as yaml instead of json
* refactor Dvcfile into Pipeline file and Single stage file
* fix tests
* dvc: fix outputs
* add more tests for collection of outputs
* add tests for data cloud/get/import/ls
* tests: test for checkouts
* Allow other checksums other than md5
* tests: use iterdir instead of os.listdir
* cleanup errors reported by cc and ds
* utils: throw DvcException instead of plain Exception
* tests: use yaml.load instead of json.load
* run: split assignments
* Update dvc/stage/exceptions.py
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* refactor stage into dvcfile
* Split create_stage out of dvcfile to Stage::create() and overwrite
* Remove logging from Repo::run
* tests: stop using --remove-outs
Co-authored-by: Ruslan Kuprieiev <[email protected]>
* dvc: refactor config
Advantages:
- read like a dict
- modify as a dict for testing or manipulation purposes
- wrap modifications into context manager to save them:
with config.edit("local") as conf:
conf["core"]["remote"] = "new-default"
Design decisions:
- dropped string constants
- remote sections are parsed into a simple subdict upon load
- remote config schema is now defined by url scheme
- relative paths are handled transparently upon load/save
- user config and remote manipulations are moved to commands
- same dev manipulations are done by simply modifying a config dict
* test: do not set cache.type for remotes that doesn't support it
* dvc: fix windows absolute paths validation in config
* test: fix windows separate drive test
* dvc: stylistic fixes in config
* add: auto convert absolute_path => relative
- fixes#2955
* use path_isin
* catch-all absolute paths in repo
* unneeded leftover
* revert realtive imports for later
* output: move abs2relpath from Base to Local
* output:local:fix parse_path
* remove path_info
* test:local versus base abs2relpath
* test:fix remaining abs2relpath test
* output: local path relative to wdir
* output: local: modify path before inheritance
* output: local: minor inheritance fix
* test: local: split output test
* test: local: positively explicit
- `tmp_dir` descends from Path
- convenient template methods to generate files and dirs, add them to
dvc and git and commit to git
- independent of old basic_env structures
- can go in any order
- modular: start with empty `tmp_dir`, initialize git with `scm`, dvc
repo with `dvc` add "repo template" with `repo_template`, ...
Imagine the scenario of shared cache. To set it up, user would do:
```
dvc config cache.dir /path
dvc config cache.shared group
```
Now, when he runs any dvc operation that involves the Repo instance,
RemoteLOCAL will also be initialized and it will currently auto-create
the directory with a regular `os.mkdir`, which is not using group
permissions. To solve that, we can't simply use `self.makdirs` instead,
as it will cause same issues if you run any dvc command before
`dvc config cache.shared group`. So what we should do is create
directories on demand, instead of creating it in advance, same as we do
in other remotes.
The change itself is pretty trivial and involved removing that `mkdir`
line, adjusting tests to not rely on cache dir existence and also
adjusting `dvc version` to not rely on cache directory existance.
Fixes#2563
Ruslan Kuprieiev
Puneetha PaiandPuneetha Pai
Saugat Pachhai
Peter Rowlands (변기호)
Casper da Costa-Luis
nik123
Paweł Redzyński
Alexander Schepanovski
Mr. Outis
Fábio Santos
Jorge Orpinel