Commit Graph
198 Commits
Author SHA1 Message Date
karajan1001 fa54c1af7c Solve run_all flaky tests
1. Modify run all to include currently running exps.
2. bump dvc-task to 0.1.5
2022-11-11 07:04:43 +05:45
karajan1001 9fbbfd07a6 Fix some celery queue realted ci failure
fix: #8403
1. remove some of the flaky mark
2. In `get_result` make sure the celery task is completed.
2022-11-11 07:04:43 +05:45
karajan1001 e0d41c7012 Make exp show handle errors better
fix: #8350

We shouldn't add locks to exp show to prevent race conditions
as this command is calling continuously by the extension.
So we make a better way to handle all kinds of reference failures.

1. Drop all based experiments if got a SCMError in baseline.
2. Drop all checkpoint experiments if any commit got a SCMError in
   one of checkpoint commit.
3. Drop the entire experiments if got a SCMError.
4. Add tests for each of the conditions above.
2022-11-08 20:12:22 +08:00
David de la Iglesia Castro 78e25747a4 exp init: Update DVCLive paths.
Closes #8531
2022-11-07 12:45:32 +01:00
dberenbaum 240f0ebdc3 fix hydra_sweeps referenced before assignment 2022-11-04 15:59:26 +01:00
Saugat Pachhai (सौगात) c02bd7f318 migrate some files to pytest 2022-11-03 23:07:28 +05:45
skshetry 6df70d388e update pre-commit; add some more hooks (#8492)
* update pre-commit; add some more hooks

* Apply suggestions from code review
2022-10-31 21:04:11 +05:45
karajan1001 9ef1d1d6e6 Move away tempdir related change from basequeue. 2022-10-29 08:53:02 +08:00
karajan1001 d5cc54ad35 dvc exp show auto solve corrupted rwlock info
fix: #8450

1. Add a new function check_rwlock to check and autocorrect rwlock info.
2. Add related tests for it.
2022-10-29 08:53:02 +08:00
karajan1001 47ece317a5 Refactor: move get_running_exps to queue
Move logic of `get_running_exps` from `repo.experiments` to each queue.
2022-10-29 08:53:02 +08:00
karajan1001 ed2ccaf54c Use celery status as the exp show status
fix: #8349
`tasks status turned to queued for 1 second before turned into success.`
is because in previous the status is using the output of
`get_running_exps` in `repo.expereiments` and when entering the
collect result progress, the `get_running_exps` will mark the tasks to
be not running because the `info.result` is not None. Here we use the
output of the celery queue as the universal standard for the tasks
status.

1. Use celery status as the exp show status
2022-10-24 14:41:27 +08:00
karajan1001 d56376c70a exp show: Use batch call on scm.describe
fix: #8451

1. Change the call of scm.describe from individual revision to a
   collection of them. Accelerate the run speed of `exp show`
2. Bump scmrepo to 0.1.2
2022-10-20 17:22:25 +08:00
David de la Iglesia Castro c12deaa62c exp show: Preserve full branch and tag names.
Closes #7933
2022-10-11 19:55:36 +09:00
karajan1001 884182f6f2 Add "status" to replace "running" and "queued" in output of exp show
fix: #7986
1. Add two new flags  `--hide-queued` and  `--hide-failed` to `exp show`
2. Allow `exp show` to show failed experiments.
3. Add unit test for the failed experiments shown.
4. Add name support for failed exp
5. Add error msg to the `exp show` output
2022-10-06 17:20:03 +08:00
karajan1001 6bd14b21ef Move infofile operation to executor and
Currently infofile dump was spread in both executor and queue classes.
put them all into executor to make them more managable. Move all ending
dump operations to the cleanup function, because the collect_result progress
might failed because of git operations, in which can guarantee them to
be run in a `finally` scope.
2022-09-26 16:25:47 +08:00
karajan1001 7fb9dcec12 Add tests for executor status
1. Move some basic test script from function tests to unit test.
2. Add success/failed tests for the status change of `tempdir`, `celery`, `workspace` running case.
2022-09-26 16:25:47 +08:00
karajan1001 f23bc71eea Use task status to replace collected.
fix: #8088

1. Use status to replace collected.
2. Make status show more accurate.

Fix lint
2022-09-26 16:25:47 +08:00
karajan1001 90109bccd7 Refactor seperate the initialization of executor and setup environment
Reason:
1. Need some more granular control over initialization progress of
   executor.

What done:
1. Seperate `init_git` and `init_cache` progress out from setup_executor
2. Move `set_ref` into `init_git`
2022-09-26 16:25:47 +08:00
David de la Iglesia Castro 3b532b7d59 exp run: Support hydra basic sweeper.
Requires `--queue` to be used alongside `--set-param`.

Doesn't strictly require `hydra.config.enabled`.

Add `get_hydra_sweeps` to `dvc/utils/hydra.py`.  Uses hydra `BasicSweeper` to generate the different sweeps.

`glob` syntax for sweeps is not supported in this P.R.

Closes #8083

---

Using setup from https://hydra.cc/docs/tutorials/basic/your_first_app/composition/ :

```console
$ dvc exp run -S "db=mysql,postgresql" -S "schema=warehouse,school" --queue
Queueing with '{'params.yaml': ['db=mysql', 'schema=warehouse']}'.
Queued experiment '5ab98b8' for future execution.
Queueing with '{'params.yaml': ['db=mysql', 'schema=school']}'.
Queued experiment '57c2fb6' for future execution.
Queueing with '{'params.yaml': ['db=postgresql', 'schema=warehouse']}'.
Queued experiment 'b9d6391' for future execution.
Queueing with '{'params.yaml': ['db=postgresql', 'schema=school']}'.
Queued experiment '145cd55' for future execution.
```
2022-09-13 13:43:30 +02:00
dependabot[bot] b6e8ba6758 build(deps-dev): Bump pylint from 2.14.5 to 2.15.0
Bumps [pylint](https://github.com/PyCQA/pylint) from 2.14.5 to 2.15.0.
- [Release notes](https://github.com/PyCQA/pylint/releases)
- [Commits](https://github.com/PyCQA/pylint/compare/v2.14.5...v2.15.0)

---
updated-dependencies:
- dependency-name: pylint
  dependency-type: direct:development
  update-type: version-update:semver-minor
...
2022-09-01 10:42:16 +08:00
Saugat Pachhai (सौगात) 639eeed43b skip tests that depend on hydra.compose in 3.11 2022-08-31 17:24:09 +02:00
David de la Iglesia Castro 91f12395f1 exp run: Support composing and dumping Hydra config.
The feature will be used depending on whether `config.hydra.enabled` is True or False.

Uses `hydra.initialize_config_dir` and `hydra.compose` (from https://hydra.cc/docs/advanced/compose_api/) to build the config and dump it to `params.yaml`. The content of the output file will be overwritten.

`config.hydra.config_dir` and `config.hydra.config_name` can be used to customize the values passed to `hydra.initialize_config_dir` and `hydra.compose`.

Can be combined with `--set-param` overrides.

Closes #8082
2022-08-31 17:24:09 +02:00
David de la Iglesia Castro 2cef130191 repo: Handle no commits for exp show and plots diff.
Make it consistent with all the other commands that use `brancher` (i.e. `dvc diff`, `metrics diff`, `params diff`)

Closes #8163
2022-08-29 01:50:14 +03:00
Peter Rowlands (변기호) 512bfc4305 tests: mark exp queue func tests xfail (#8186) 2022-08-25 21:04:05 +05:45
Ruslan Kuprieiev 3fc9f323a7 fs: don't import SSHFileSystem 2022-08-18 00:23:40 +03:00
skshetry 7a0b3e9377 Update tests/func/experiments/test_queue.py 2022-08-09 17:50:48 +08:00
karajan1001 d6f8e5a507 Add flaky to a queue related test.
This is a flaky, the queue tasks status might remain "Running" even if
it had already been completed, beside sometimes I also noticed it raise
a pytest fixture error.
2022-08-09 17:50:48 +08:00
David de la Iglesia Castro 31635b8312 exp run: Use hydra for parsing --set-param.
- Overriding a config value : foo.bar=value
- Appending a config value : +foo.bar=value
- Appending or overriding a config value : ++foo.bar=value
- Removing a config value : ~foo.bar, ~foo.bar=value

See https://hydra.cc/docs/advanced/override_grammar/basic/#modifying-the-config-object

---

Breaking changes:

To modify a list, `foo[0]=bar` must now be passed as `foo.0=bar`.

Modifying a nested list inside a dictionary is not supported by omegaconf.

---

Closes #4883
Closes #5868
Closes #6129
2022-08-05 17:53:24 +02:00
karajan1001 905c416ffc Decouple queue clear and remove commands 2022-08-05 16:09:51 +09:00
Ruslan Kuprieiev fcc7240617 odb: use odb.path instead of odb.cache_dir 2022-08-03 21:10:28 +03:00
karajan1001 9dfe88e2b1 exp run: workspace status wrong
fix: #8045
2022-07-26 15:02:09 +05:45
David de la Iglesia Castro ed1d8e2b8f exp: init: Use persist: true if checkpoint. 2022-07-21 13:21:06 +02:00
Peter Rowlands 80272a0770 queue: cleanup flaky tests 2022-07-12 21:39:49 +09:00
karajan1001 02681f2e65 Rename _all to all_ remove some tricky func test. 2022-07-12 21:39:49 +09:00
karajan1001 b37524603a Queue remove: Can remove successed,failed tasks msgs
Followed from #7592

1. Seperate remove method to a new file.
2. Add queued, failed, processed flags to remove.
3. Add new unit tests for queue status --queue/fail/success
4. Implement methods to remove done tasks.
5. add some new unit and functional test for celery_queue.remove
6. bump into dvc-task version 0.0.13
2022-07-12 21:39:49 +09:00
Peter Rowlands 1f7b802f79 exp show: collect running standalone tempdir experiments 2022-07-12 21:39:49 +09:00
Peter Rowlands 9e0788aa3a exp run: preserve --temp standalone behavior 2022-07-12 21:39:49 +09:00
Peter Rowlands e1cf62a583 exp queue: add separate standalone/tempdir implementation 2022-07-12 21:39:49 +09:00
Peter Rowlands 570f4345a0 exp queue: implement queue.logs() support 2022-07-12 21:39:49 +09:00
Peter Rowlands 425d0701c9 exp queue: return completed exps in queue status 2022-07-12 21:39:49 +09:00
Peter Rowlands 99a11f7056 exp: save failed queue runs in separate stash/reflog 2022-07-12 21:39:49 +09:00
Peter Rowlands 7ece26d58a tests: re-enable exp show celery tests 2022-07-12 21:39:49 +09:00
Peter Rowlands f26664a569 exp: re-enable run --run-all with celery queue 2022-07-12 21:39:49 +09:00
Peter Rowlands 4b0c65093a tests: use pytest-celery for exp tests 2022-07-12 21:39:49 +09:00
Peter Rowlands 1c474e8f30 exp: re-enable most tmpdir/queue tests 2022-07-12 21:39:49 +09:00
Peter Rowlands 46c734eb7e exp: temporarily mark tmpdir/queue tests as xfail 2022-07-12 21:39:49 +09:00
Peter Rowlands 7113568c60 exp: refactor base.py into refs.py and exceptions.py 2022-07-12 21:39:49 +09:00
Peter Rowlands 6143146974 exp: refactor stash handling into separate module 2022-07-12 21:39:49 +09:00
David de la Iglesia Castro 20f69a121e api: Move to sub-package.
Split into sub-modules.

Split tests.
2022-06-21 20:52:19 +03:00
Peter Rowlands 31f67cd3de exp apply: preserve untracked files 2022-06-19 22:41:22 -07:00