Commit Graph
3378 Commits
Author SHA1 Message Date
Saugat Pachhai (सौगात) 37921d618d dvc: remove dvc.objects, fix imports 2022-05-20 14:02:08 +05:45
Saugat Pachhai (सौगात) 95c6cea36d tests: restructure some tests for objects/data 2022-05-19 18:38:21 +05:45
Saugat Pachhai (सौगात) 82dc67d890 objects: use separate Tqdm implementations
Now dvc.objects and dvc.data uses the implementation from dvc.objects
for Tqdm progress bars. This is temporary. :)
2022-05-19 18:07:47 +05:45
Saugat Pachhai (सौगात) 2057c471bb data.checkout: remove dependency on DVC; prompts and DvcException 2022-05-19 15:11:27 +03:00
Saugat Pachhai (सौगात) f23d31af64 fs/data: move repo related utils to dvc
This moves get_fs_config/get_fs_cloud and ODBManager to DVC
as they require DVC related utilities, and we don't need them
strictly in dvc-objects/dvc-data.
This also adds support to ReferenceHashFile to load from
any filesystem, using it's module name and filename.
Now we can get rid of DVCFileSystem dependency in
ReferenceHashFile.
This is a temporary solution, we really need a registry.
(I am not quite sure if this works in pyinstaller mode,
but I think it should, it's how fsspec does it if I understand
correctly.)
2022-05-18 19:39:09 +03:00
Saugat Pachhai (सौगात) cf5d3830c5 dvc.objects: use own internal error instead of DvcException
transfer raises internal TransferError, merge raises internal MergeError
and local ODB raises ODBError on unprotect.
transfer's error is reraised to FileTransferError back in DataCloud.
2022-05-18 12:22:57 +03:00
Saugat Pachhai (सौगात) 32cd6c2c03 dvc.objects: use stub ignore in dvc.objects/dvc.data
This commit:
* defines a `Ignore` protocol in `dvc.objects`, that expects a `find` method.
  This will be used in dvc-data and dvc-objects instead of depending on dvc.ignore.
  dvcignore is expected to respect this protocol, which it does.
* renames `dvcignore` kwarg to `ignore` in `dvc-data` and `dvc-objects`.
* teaches dvc.cli that `IgnoreInCollectedError` is a known exception
   and is logged correctly and adds a test for the behaviour.

I am not happy that we need to hardcode `.dvcignore` in dvc-data
but I don't see any easy way, since we always try to avoid
staging if the tree contains .dvcignore file, even if .dvcignore
is not passed.
2022-05-18 12:22:28 +03:00
Saugat Pachhai (सौगात) 3872f79dad objects.fs: do not use format_link, DvcException and fix_env from DVC
* Introduce ConfigError and AuthError in dvc.objects.fs and raise it
  instead of dvc.config.ConfigError.
* Provide hints and links by catching those errors in dvc.cli.main,
  i.e decouple UI messages from filesystems for AuthError and
  ConfigError.
* Copy flatten/unflatten utils to dvc.objects.fs.utils.
2022-05-17 18:23:29 +03:00
Saugat Pachhai (सौगात) 48176b80f6 fs: do not use DvcException in filesystems
* Refactor check_requires, move UI messages to dvc.cli
* Refactor link related error
2022-05-17 16:48:38 +03:00
Saugat Pachhai (सौगात) 8c9a9e9a1f objects.fs: move schemes to objects.fs 2022-05-17 17:02:14 +05:45
Saugat Pachhai (सौगात) 36605eea4c objects.hash: rename HashedStreamReader to HashStreamFile 2022-05-17 13:25:38 +03:00
Saugat Pachhai (सौगात) 752e10a834 dvc.objects: move HashedStreamReader to objects, use it for calculating fobj_md5
Now HashedStreamReader will be used to calculate md5 in fobj_md5/hash_file.

Also:
* adds in `bytes_md5` that may be useful for testing.
* adds a hasher-registry with hashlib
* adds a `text=` kwarg to be able to specify to use dos2unix or not
  (useful for testing)
* makes `localfs` the default filesystem when `fs` arg is not passed
  (makes it easier to test in the REPL)
2022-05-17 13:25:38 +03:00
Saugat Pachhai (सौगात) d82e094b13 fs: move filesystems to dvc.objects.fs.implementations 2022-05-16 17:54:57 +03:00
Saugat Pachhai (सौगात) 570e3a5359 dvc.fs: move fs to dvc.objects.fs
Some of the APIs/FileSystems are reimported inside dvc.fs module.
2022-05-16 13:15:19 +03:00
Saugat Pachhai (सौगात) dc1d3e880a dvc.objects.cache: set type in a more compatible way
It turns out that diskcache.Disk saves passed arguments to the database
and uses that all the time. So this means that we are not forward
compatible as it breaks moving from newer version of DVC to an older
one. We don't promise this, but this breaks our benchmarks which
are probably not isolated enough.

Regarding the use of cache, it is a bit iffy to extend it this way.
We only need this type for error messages. We could consider removing
this, but since the error message is documented and it's not too hard
to extend this :), I decided to preserve the message.
2022-05-13 11:00:31 +05:45
Saugat Pachhai (सौगात) 3f5757a0a5 dvc.objects: move hashing functions to dvc.objects
This commit moves `HashedStreamReader`/`get_hash_file`/`file_md5`
into `dvc.objects.hash`.

The `get_hash_file` has been renamed to `hash_file`.
This also copies `relpath` and `is_exec` to the `dvc.fs.utils`.
2022-05-12 20:33:18 +03:00
Daniele Trifirò 7a795f79db dvc.data: save and try loading raw dir objects
When staging a directory, always save a "raw dir object" to the odb.
If the corresponding ".dir" object has not been added to the odb,
`stage()` calls can load the tree from the raw dir object instead of
rebuilding it by walking the directory.

This can lead to significant speed improvements when calling
`dvc status` for modified directories.

Fixes #7390
2022-05-12 19:27:36 +03:00
skshetry b3fb0dfdad dvc.objects: extend diskcache to handle pickle errors (#7734)
dvc.objects: extend diskcache to handle pickle errors
2022-05-12 21:12:33 +05:45
Saugat Pachhai (सौगात) ee29888e18 dvc.objects: move get_mtime_and_size to dvc.objects.utils 2022-05-12 18:02:42 +03:00
Saugat Pachhai (सौगात) 11eaa87849 add typings to istextfile and system
Also moves umask to dvc.fs.system
2022-05-12 18:02:42 +03:00
Saugat Pachhai (सौगात) b4faa5616f system: change System class to a dvc.fs.system module 2022-05-12 18:02:42 +03:00
Saugat Pachhai (सौगात) e585c52187 istextfile: move to dvc.objects 2022-05-12 18:02:42 +03:00
Saugat Pachhai (सौगात) 4add88f627 objects: move System to dvc.fs 2022-05-12 18:02:42 +03:00
Saugat Pachhai (सौगात) aac2fc0ca0 dvc.fs: rename fs.utils to fs.generic
In the spirit of fsspec.generic, it is for cross-filesystem operations.
Trying to avoid `fs.utils` as much as possible, but we have some
functions that are really utilities coming, so I am making a place
for them. :)
2022-05-12 18:02:15 +03:00
Ruslan Kuprieiev 005d56eedf fs: rename RepoFileSystem to DvcFileSystem 2022-05-12 00:39:41 +03:00
Ruslan Kuprieiev b6d25825c8 fs: rename DvcFileSystem to DataFileSystem
Current naming for `DvcFileSystem` and `RepoFileSystem` is confusing, because
dvc is not only about data and it is much more natural to expect something
named `dvcfs` to include complete view for your whole repo (including git
files), which is what `repofs` is doing right now.

`DvcFileSystem` can provide a view not only for the repo data, but also for
external data (e.g. local external outputs). So it makes more sense to call
it a `DataFileSystem`, since it really represents the data management side
of dvc.
2022-05-11 21:49:57 +03:00
Karthikeyan SingaravelanandDavid de la Iglesia Castro 3faf413288 Use sorted output in test since order is not deterministic.
Co-authored-by: David de la Iglesia Castro <[email protected]>
2022-05-11 18:40:21 +03:00
Karthikeyan Singaravelan a3261637de dag: fix dot file rendering order. 2022-05-11 18:40:21 +03:00
Karthikeyan Singaravelan b8d738220d Revert other tests and test only glob exception. 2022-05-11 18:37:09 +03:00
pre-commit-ci[bot] fb36db450f [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
2022-05-11 18:37:09 +03:00
Karthikeyan SingaravelanandDavid de la Iglesia Castro 946ceb288d Update tests/func/test_data_cloud.py
Co-authored-by: David de la Iglesia Castro <[email protected]>
2022-05-11 18:37:09 +03:00
Karthikeyan Singaravelan 8d99ce06aa Move test to test_data_cloud. 2022-05-11 18:37:09 +03:00
Karthikeyan Singaravelan 9b3873c4f0 Move exception raising to glob_targets to cover all commands. 2022-05-11 18:37:09 +03:00
Karthikeyan Singaravelan e177f041c8 Fail on sync when there is no match for glob. 2022-05-11 18:37:09 +03:00
Ruslan Kuprieiev a80a85e6bd dvc: detach gitfs from local paths
Our gitfs paths are currently tied to the local path in which the cloned
repository resides in, which results in a lot of hacky assumptions throughout
the code.

This PR detaches gitfs from local paths completely, making dvc work with a
proper fsspec gitfs implementation.

Part of #7543
2022-05-11 18:17:39 +03:00
Saugat Pachhai (सौगात) 14c9348f93 dvc.objects: move hash_info, state and meta into dvc.objects 2022-05-11 17:35:48 +03:00
karajan1001 7a1f133f29 dvc ls: not raise PathMissingError on empty dir.
fix #5841
2022-05-11 16:38:58 +03:00
Gao 45a01c6a30 Revert "dvc ls: not raise PathMissingError on empty dir."
This reverts commit 09afd2a0cd.
2022-05-11 14:54:13 +03:00
karajan1001 09afd2a0cd dvc ls: not raise PathMissingError on empty dir.
fix #5841
2022-05-11 11:24:32 +03:00
Saugat Pachhai (सौगात) d92c6fed67 fs.callbacks: simplify, ensure None does not break them, lazy richcallbacks 2022-05-10 20:37:21 +05:45
dberenbaum 477f266dc5 exp init: fixes #7534; simplifies/updates exp init --live 2022-05-09 20:58:27 +05:45
Ruslan Kuprieiev b14a972cd0 repofs: use / as root_marker
This makes dvcfs/repofs much easier to work with and allows it to support
isabs/abspath/etc correctly, as previously any full path (with root_marker "")
would be impossible to distinguish from a relative one.

This also detaches external workspaces from the main repo workspace in
DvcFileSystem, which was necessary to be able to distinguish dvcfs abspaths
from local external output paths. Note that currently we still have limited
support for those (e.g. get/api supports them, but import doesn't) and this
change keeps it that way.
2022-05-08 17:19:53 +03:00
Samuel Knight 1f5f2f5c97 dvcfile: preserve 'remote' on add and commit
Preserves 'remote' output on dvc add and dvc commit.

Fixes #7356
2022-05-05 08:36:37 +05:45
Paweł Redzyński 9d476aab8b plots: image converter return absolute paths 2022-05-04 10:57:13 +02:00
Saugat Pachhai (सौगात) 8a0c5680e0 fs: remove download 2022-05-03 14:42:19 +05:45
Saugat Pachhai (सौगात) 61699d1d66 fs: remove upload function 2022-05-03 11:22:21 +05:45
Ruslan Kuprieiev 58d960a47c Revert "fs.utils: add upload that can be conditionally atomic"
This reverts commit dd187df667.
2022-04-30 17:34:39 +03:00
Saugat Pachhai (सौगात) dd187df667 fs.utils: add upload that can be conditionally atomic
The PR also makes odb.add operations atomic, but the checkout is still
not atomic.
2022-04-29 23:02:15 +03:00
karajan1001 c81d841fd7 exp pull/push: better result handling in exp sharing(#7448)
fix: #7448
Current we skip on those experiments which already existed on both sides, but
do not exclude them from the result list. And if we have diverged experiment,
pulling/pushing them will stop the current progress and raise an exception, but
didn't give any information on the condition of other experiments.

1. Change the exp pull and push to match the new API in `scmrepo`.
2. Handle sync status after `exp pull/push` finished.
3. Bump scmrepo to 0.0.19

Co-authored-by:
2022-04-28 19:56:15 +08:00
Saugat Pachhai (सौगात) 0d48598e4b fs.ssh: remove unused vars 2022-04-27 17:56:08 +05:45