diff --git a/dvc/scm.py b/dvc/scm.py
index 72dc2185c..eadaf9943 100644
--- a/dvc/scm.py
+++ b/dvc/scm.py
@@ -2,6 +2,7 @@ import os
 
 from dvc.exceptions import DvcException
 from dvc.logger import Logger
+from dvc.utils import fix_env
 
 
 class SCMError(DvcException):
@@ -87,6 +88,12 @@ class Git(Base):
         except InvalidGitRepositoryError:
             raise SCMError('{} is not a git repository'.format(root_dir))
 
+        # NOTE: fixing LD_LIBRARY_PATH for binary built by PyInstaller.
+        # http://pyinstaller.readthedocs.io/en/stable/runtime-information.html
+        env = fix_env(None)
+        lp = env.get('LD_LIBRARY_PATH', None)
+        self.repo.git.update_environment(LD_LIBRARY_PATH=lp)
+
     @staticmethod
     def is_repo(root_dir):
         git_dir = os.path.join(root_dir, Git.GIT_DIR)
diff --git a/dvc/utils.py b/dvc/utils.py
index 10aa15716..822f93d98 100644
--- a/dvc/utils.py
+++ b/dvc/utils.py
@@ -2,6 +2,7 @@
 Helpers for other modules.
 """
 import os
+import sys
 import math
 import json
 import shutil
@@ -144,11 +145,14 @@ def fix_env(env):
     else:
         env = env.copy()
 
-    lp_key = 'LD_LIBRARY_PATH'
-    lp_orig = env.get(lp_key + '_ORIG')
-    if lp_orig is not None:
-        env[lp_key] = lp_orig
-    else:
-        env.pop(lp_key, None)
+    # NOTE: Check if we are in a bundle
+    # https://pythonhosted.org/PyInstaller/runtime-information.html
+    if getattr(sys, 'frozen', False):
+        lp_key = 'LD_LIBRARY_PATH'
+        lp_orig = env.get(lp_key + '_ORIG', None)
+        if lp_orig is not None:
+            env[lp_key] = lp_orig
+        else:
+            env.pop(lp_key, None)
 
     return env