diff --git a/.flake8 b/.flake8
index fd87e09b7..736ce6620 100644
--- a/.flake8
+++ b/.flake8
@@ -1,19 +1,20 @@
 [flake8]
-ignore=
+max_line_length = 88
+extend-ignore=
     # Whitespace before ':'
     E203
-    # Too many leading '#' for block comment
-    E266
     # Line break occurred before a binary operator
     W503
     # unindexed parameters in the str.format, see:
     # https://pypi.org/project/flake8-string-format/
     P1
-    # use `!r` instead of surrounding by quotes
-    B028
-max_line_length = 88
 max-complexity = 10
-select = B,C,E,F,W,T4,B902,T,P,TYP
 show_source = true
 count = true
 min_python_version = 3.8.0
+per-file-ignores =
+    dvc/testing/benchmarks/conftest.py:F401
+    dvc/testing/conftest.py:F401
+    dvc/testing/plugin.py:F401
+    tests/conftest.py:F401
+    tests/func/experiments/executor/test_ssh.py:F401
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index bd0518508..362bc4824 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -23,17 +23,6 @@ repos:
       - id: mixed-line-ending
       - id: sort-simple-yaml
       - id: trailing-whitespace
-  - repo: https://github.com/lovesegfault/beautysh
-    rev: v6.2.1
-    hooks:
-      - id: beautysh
-        args: ["-i", "2"]
-  - repo: https://github.com/asottile/pyupgrade
-    rev: v3.9.0
-    hooks:
-      - id: pyupgrade
-        args:
-          - --py38-plus
   - repo: https://github.com/psf/black
     rev: 23.7.0
     hooks:
@@ -43,7 +32,7 @@ repos:
     hooks:
       - id: isort
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: 'v0.0.278'
+    rev: 'v0.0.282'
     hooks:
       - id: ruff
   - repo: https://github.com/codespell-project/codespell
@@ -52,13 +41,10 @@ repos:
       - id: codespell
         additional_dependencies: ["tomli"]
   - repo: https://github.com/PyCQA/flake8
-    rev: 6.0.0
+    rev: 6.1.0
     hooks:
       - id: flake8
         additional_dependencies:
-          - flake8-bugbear
-          - flake8-comprehensions
-          - flake8-debugger
           - flake8-string-format
           - flake8-typing-imports
   - repo: https://github.com/PyCQA/bandit
diff --git a/dvc/api/data.py b/dvc/api/data.py
index a1f9e78c3..d9951b4ce 100644
--- a/dvc/api/data.py
+++ b/dvc/api/data.py
@@ -67,7 +67,7 @@ class _OpenContextManager(GCM):
         raise AttributeError("dvc.api.open() should be used in a with statement.")
 
 
-def open(  # noqa, pylint: disable=redefined-builtin
+def open(  # noqa: A001, pylint: disable=redefined-builtin
     path: str,
     repo: Optional[str] = None,
     rev: Optional[str] = None,
diff --git a/dvc/cli/__init__.py b/dvc/cli/__init__.py
index 74e457dc6..10ee56902 100644
--- a/dvc/cli/__init__.py
+++ b/dvc/cli/__init__.py
@@ -230,7 +230,7 @@ def main(argv=None):  # noqa: C901, PLR0912, PLR0915
         logger.exception("")
     except DvcParserError:
         ret = 254
-    except Exception as exc:  # noqa, pylint: disable=broad-except
+    except Exception as exc:  # noqa: BLE001, pylint: disable=broad-except
         # pylint: disable=no-member
         ret = _log_exceptions(exc) or 255
 
diff --git a/dvc/compare.py b/dvc/compare.py
index cceb9d7bd..ad57c3268 100644
--- a/dvc/compare.py
+++ b/dvc/compare.py
@@ -57,7 +57,7 @@ class TabularData(MutableSequence[Sequence["CellT"]]):
         return self._columns[name]
 
     def items(self) -> ItemsView[str, Column]:
-        projection = {k: self.column(k) for k in self.keys()}  # noqa: SIM118
+        projection = {k: self.column(k) for k in self.keys()}
         return projection.items()
 
     def keys(self) -> List[str]:
@@ -171,8 +171,7 @@ class TabularData(MutableSequence[Sequence["CellT"]]):
                 self.add_column(key)
 
         row: List["CellT"] = [
-            with_value(d.get(key), self._fill_value)
-            for key in self.keys()  # noqa: SIM118
+            with_value(d.get(key), self._fill_value) for key in self.keys()
         ]
         self.append(row)
 
@@ -227,7 +226,7 @@ class TabularData(MutableSequence[Sequence["CellT"]]):
             to_drop -= match_line
 
         if axis == "rows":
-            for name in self.keys():  # noqa: SIM118
+            for name in self.keys():
                 self._columns[name] = Column(
                     [x for n, x in enumerate(self._columns[name]) if n not in to_drop]
                 )
@@ -275,7 +274,7 @@ class TabularData(MutableSequence[Sequence["CellT"]]):
                 else:
                     unique_rows.append(tuple_row)
 
-            for name in self.keys():  # noqa: SIM118
+            for name in self.keys():
                 self._columns[name] = Column(
                     [
                         x
diff --git a/dvc/exceptions.py b/dvc/exceptions.py
index 5c6b2844d..fd0a0b26e 100644
--- a/dvc/exceptions.py
+++ b/dvc/exceptions.py
@@ -297,7 +297,7 @@ class URLMissingError(DvcException):
         super().__init__(f"The path '{url}' does not exist")
 
 
-class IsADirectoryError(DvcException):  # noqa,pylint:disable=redefined-builtin
+class IsADirectoryError(DvcException):  # noqa: A001,pylint:disable=redefined-builtin
     """Raised when a file operation is requested on a directory."""
 
 
diff --git a/dvc/logger.py b/dvc/logger.py
index 2ab0b9311..b49468840 100644
--- a/dvc/logger.py
+++ b/dvc/logger.py
@@ -160,7 +160,7 @@ class LoggerHandler(logging.StreamHandler):
             self.flush()
         except (BrokenPipeError, RecursionError):
             raise
-        except Exception:  # noqa, pylint: disable=broad-except
+        except Exception:  # noqa: BLE001, pylint: disable=broad-except
             self.handleError(record)
 
 
diff --git a/dvc/repo/__init__.py b/dvc/repo/__init__.py
index 69475d8b9..33c14b80a 100644
--- a/dvc/repo/__init__.py
+++ b/dvc/repo/__init__.py
@@ -497,7 +497,7 @@ class Repo:
         used_run_cache=None,
         revs=None,
         num=1,
-        push: bool = False,  # noqa: F811
+        push: bool = False,
     ):
         """Get the stages related to the given target and collect
         the `info` of its outputs.
diff --git a/dvc/repo/plots/__init__.py b/dvc/repo/plots/__init__.py
index 5d1053455..878df858a 100644
--- a/dvc/repo/plots/__init__.py
+++ b/dvc/repo/plots/__init__.py
@@ -483,7 +483,7 @@ def _collect_pipeline_files(repo, targets: List[str], props, onerror=None):
             if isinstance(elem, str):
                 dvcfile_defs_dict[elem] = None
             else:
-                k, v = list(elem.items())[0]
+                k, v = next(iter(elem.items()))
                 dvcfile_defs_dict[k] = v
 
         resolved = _resolve_definitions(
diff --git a/dvc/repo/worktree.py b/dvc/repo/worktree.py
index 6fd86874b..9cf39253b 100644
--- a/dvc/repo/worktree.py
+++ b/dvc/repo/worktree.py
@@ -427,7 +427,7 @@ def _get_update_diff_index(
         meta_cmp_key=partial(_meta_checksum, remote.fs),
         with_unchanged=True,
     ):
-        if change.typ == ADD or change.typ == MODIFY:
+        if change.typ in (ADD, MODIFY):
             entry = change.new
             # preserve md5's which were calculated in out.save() after
             # downloading
diff --git a/dvc/scm.py b/dvc/scm.py
index fd3239522..945fb33cf 100644
--- a/dvc/scm.py
+++ b/dvc/scm.py
@@ -67,7 +67,7 @@ def map_scm_exception(with_cause: bool = False) -> Iterator[None]:
         into = SCMError(str(exc))
         if with_cause:
             raise into from exc
-        raise into
+        raise into  # noqa: B904
 
 
 @overload
diff --git a/dvc/testing/benchmarks/conftest.py b/dvc/testing/benchmarks/conftest.py
index 12c22cdf0..ac47567f7 100644
--- a/dvc/testing/benchmarks/conftest.py
+++ b/dvc/testing/benchmarks/conftest.py
@@ -1 +1 @@
-from .fixtures import *  # noqa, pylint: disable=wildcard-import
+from .fixtures import *  # noqa: F403 # pylint: disable=wildcard-import
diff --git a/dvc/testing/conftest.py b/dvc/testing/conftest.py
index 12c22cdf0..6e01dd914 100644
--- a/dvc/testing/conftest.py
+++ b/dvc/testing/conftest.py
@@ -1 +1 @@
-from .fixtures import *  # noqa, pylint: disable=wildcard-import
+from .fixtures import *  # noqa: F403, pylint: disable=wildcard-import
diff --git a/dvc/testing/plugin.py b/dvc/testing/plugin.py
index 435f9140c..54c9e468f 100644
--- a/dvc/testing/plugin.py
+++ b/dvc/testing/plugin.py
@@ -1,5 +1,5 @@
-from .benchmarks.fixtures import *  # noqa, pylint: disable=wildcard-import
-from .fixtures import *  # noqa, pylint: disable=wildcard-import
+from .benchmarks.fixtures import *  # noqa: F403, pylint: disable=wildcard-import
+from .fixtures import *  # noqa: F403, pylint: disable=wildcard-import
 
 
 def pytest_generate_tests(metafunc):
diff --git a/dvc/utils/serialize/__init__.py b/dvc/utils/serialize/__init__.py
index c5f7f9759..5afbab435 100644
--- a/dvc/utils/serialize/__init__.py
+++ b/dvc/utils/serialize/__init__.py
@@ -1,11 +1,11 @@
 from collections import defaultdict
 from typing import DefaultDict
 
-from ._common import *  # noqa, pylint: disable=wildcard-import
-from ._json import *  # noqa, pylint: disable=wildcard-import
-from ._py import *  # noqa, pylint: disable=wildcard-import
-from ._toml import *  # noqa, pylint: disable=wildcard-import
-from ._yaml import *  # noqa, pylint: disable=wildcard-import
+from ._common import *  # noqa: F403, pylint: disable=wildcard-import
+from ._json import *  # noqa: F403, pylint: disable=wildcard-import
+from ._py import *  # noqa: F403, pylint: disable=wildcard-import
+from ._toml import *  # noqa: F403, pylint: disable=wildcard-import
+from ._yaml import *  # noqa: F403, pylint: disable=wildcard-import
 
 LOADERS: DefaultDict[str, LoaderFn] = defaultdict(  # noqa: F405
     lambda: load_yaml  # noqa: F405
diff --git a/pyproject.toml b/pyproject.toml
index d065fb907..244dd4255 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -300,7 +300,7 @@ ignore-variadic-names = true
 known-first-party = ["dvc", "dvc_data", "dvc_objects", "dvc_render", "dvc_task", "tests"]
 
 [tool.ruff.pep8-naming]
-ignore-names = ["M", "SCM"]
+extend-ignore-names = ["M", "SCM"]
 
 [tool.ruff.per-file-ignores]
 "dvc/commands/**" = ["N806"]
diff --git a/tests/conftest.py b/tests/conftest.py
index 19e530baf..1422860cd 100644
--- a/tests/conftest.py
+++ b/tests/conftest.py
@@ -7,11 +7,11 @@ import pytest
 
 from dvc import env
 from dvc.stage import PipelineStage
-from dvc.testing.fixtures import *  # noqa, pylint: disable=wildcard-import
+from dvc.testing.fixtures import *  # noqa: F403, pylint: disable=wildcard-import
 
-from .dir_helpers import *  # noqa, pylint: disable=wildcard-import
-from .remotes import *  # noqa, pylint: disable=wildcard-import
-from .scripts import *  # noqa, pylint: disable=wildcard-import
+from .dir_helpers import *  # noqa: F403 # pylint: disable=wildcard-import
+from .remotes import *  # noqa: F403 # pylint: disable=wildcard-import
+from .scripts import *  # noqa: F403, pylint: disable=wildcard-import
 
 # Prevent updater and analytics from running their processes
 os.environ["DVC_TEST"] = "true"
diff --git a/tests/func/api/test_data.py b/tests/func/api/test_data.py
index 09267e8a8..348d7c598 100644
--- a/tests/func/api/test_data.py
+++ b/tests/func/api/test_data.py
@@ -5,7 +5,7 @@ from funcy import first, get_in
 
 from dvc import api
 from dvc.exceptions import OutputNotFoundError, PathMissingError
-from dvc.testing.api_tests import TestAPI  # noqa, pylint: disable=unused-import
+from dvc.testing.api_tests import TestAPI  # noqa: F401, pylint: disable=unused-import
 from dvc.testing.tmp_dir import make_subrepo
 from dvc.utils.fs import remove
 
diff --git a/tests/func/experiments/conftest.py b/tests/func/experiments/conftest.py
index df4cffb4d..ab478326e 100644
--- a/tests/func/experiments/conftest.py
+++ b/tests/func/experiments/conftest.py
@@ -1,6 +1,7 @@
 import pytest
 
-from tests.unit.repo.experiments.conftest import (  # noqa, pylint disable=unused-argument
+# pylint: disable-next=unused-argument
+from tests.unit.repo.experiments.conftest import (  # noqa: F401
     exp_stage,
     failed_exp_stage,
     session_app,
diff --git a/tests/func/experiments/executor/test_ssh.py b/tests/func/experiments/executor/test_ssh.py
index 7714d1912..7f4ecdd88 100644
--- a/tests/func/experiments/executor/test_ssh.py
+++ b/tests/func/experiments/executor/test_ssh.py
@@ -10,7 +10,9 @@ from dvc_ssh.tests.cloud import TEST_SSH_KEY_PATH, TEST_SSH_USER
 from dvc.repo.experiments.executor.base import ExecutorInfo, ExecutorResult
 from dvc.repo.experiments.executor.ssh import SSHExecutor
 from dvc.repo.experiments.refs import EXEC_HEAD, EXEC_MERGE
-from tests.func.machine.conftest import *  # noqa, pylint: disable=wildcard-import
+
+# pylint: disable-next=wildcard-import
+from tests.func.machine.conftest import *  # noqa: F403
 
 
 @contextmanager
diff --git a/tests/func/test_add.py b/tests/func/test_add.py
index 6154d0eee..e340e6422 100644
--- a/tests/func/test_add.py
+++ b/tests/func/test_add.py
@@ -452,9 +452,9 @@ def temporary_windows_drive(tmp_path_factory):
         if len(s) > 0
     ]
 
-    new_drive_name = [
+    new_drive_name = next(
         letter for letter in string.ascii_uppercase if letter not in drives
-    ][0]
+    )
     new_drive = f"{new_drive_name}:"
 
     target_path = tmp_path_factory.mktemp("tmp_windows_drive")
diff --git a/tests/func/test_config.py b/tests/func/test_config.py
index 5e6e297c9..9829b3ad1 100644
--- a/tests/func/test_config.py
+++ b/tests/func/test_config.py
@@ -218,7 +218,7 @@ def test_list_bad_args(tmp_dir, dvc, caplog, args):
 
 
 def test_set_invalid_key(dvc):
-    with pytest.raises(ConfigError, match=r"extra keys not allowed"):  # noqa: PT012
+    with pytest.raises(ConfigError, match=r"extra keys not allowed"):
         with dvc.config.edit() as conf:
             conf["core"]["invalid_key"] = "value"
 
@@ -227,9 +227,7 @@ def test_merging_two_levels(dvc):
     with dvc.config.edit() as conf:
         conf["remote"]["test"] = {"url": "ssh://example.com"}
 
-    with pytest.raises(  # noqa: PT012
-        ConfigError, match=r"expected 'url' for dictionary value"
-    ):
+    with pytest.raises(ConfigError, match=r"expected 'url' for dictionary value"):
         with dvc.config.edit("global") as conf:
             conf["remote"]["test"] = {"password": "1"}
 
diff --git a/tests/func/test_data_cloud.py b/tests/func/test_data_cloud.py
index 000d6ab20..ebefe848a 100644
--- a/tests/func/test_data_cloud.py
+++ b/tests/func/test_data_cloud.py
@@ -10,7 +10,9 @@ from dvc.cli import main
 from dvc.exceptions import CheckoutError
 from dvc.repo.open_repo import clean_repos
 from dvc.stage.exceptions import StageNotFound
-from dvc.testing.remote_tests import TestRemote  # noqa, pylint: disable=unused-import
+from dvc.testing.remote_tests import (  # noqa: F401, pylint: disable=unused-import
+    TestRemote,
+)
 from dvc.utils.fs import remove
 from dvc_data.hashfile.db import HashFileDB
 from dvc_data.hashfile.db.local import LocalHashFileDB
diff --git a/tests/func/test_stage.py b/tests/func/test_stage.py
index 51814fcfc..c8beb7baf 100644
--- a/tests/func/test_stage.py
+++ b/tests/func/test_stage.py
@@ -84,7 +84,7 @@ def test_default_wdir_ignored_in_checksum(tmp_dir, dvc):
     stage = dvc.run(cmd="cp bar foo", deps=["bar"], outs=["foo"], name="copy-foo-bar")
 
     d = stage.dumpd()
-    assert Stage.PARAM_WDIR not in d.keys()
+    assert Stage.PARAM_WDIR not in d
 
     d = load_yaml("dvc.yaml")
     assert Stage.PARAM_WDIR not in d["stages"]["copy-foo-bar"]
@@ -246,13 +246,17 @@ def test_collect_symlink(tmp_dir, dvc, with_deps):
         with pytest.raises(StageNotFoundError):
             dvc.stage.collect(target=str(data_link / "foo.dvc"), with_deps=with_deps)
     else:
-        stage = list(
-            dvc.stage.collect(target=str(data_link / "foo.dvc"), with_deps=with_deps)
-        )[0]
+        stage = next(
+            iter(
+                dvc.stage.collect(
+                    target=str(data_link / "foo.dvc"), with_deps=with_deps
+                )
+            )
+        )
 
         assert stage.addressing == os.path.join("data_link", "foo.dvc")
 
-    stage = list(dvc.stage.collect(target=f"{foo_path}.dvc", with_deps=with_deps))[0]
+    stage = next(iter(dvc.stage.collect(target=f"{foo_path}.dvc", with_deps=with_deps)))
 
     assert stage.addressing == os.path.join("data", "foo.dvc")
 
diff --git a/tests/remotes/__init__.py b/tests/remotes/__init__.py
index 02c1b15ed..c95987efd 100644
--- a/tests/remotes/__init__.py
+++ b/tests/remotes/__init__.py
@@ -1,4 +1,4 @@
-from dvc_ssh.tests.fixtures import (  # noqa, pylint: disable=unused-import
+from dvc_ssh.tests.fixtures import (  # noqa: F401, pylint: disable=unused-import
     make_ssh,
     ssh,
     ssh_server,